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The map label for this gene is yqjC

Identifier: 157162579

GI number: 157162579

Start: 3297882

End: 3298250

Strand: Direct

Name: yqjC

Synonym: EcHS_A3285

Alternate gene names: 157162579

Gene position: 3297882-3298250 (Clockwise)

Preceding gene: 157162577

Following gene: 157162580

Centisome position: 71.02

GC content: 48.24

Gene sequence:

>369_bases
ATGAAATACCGCATCGCTTTAGCTGTTTCTCTTTTTGCTCTTAGTGCTGGTAGTTATGCCACTACCCTGTGTCAGGAAAA
GGAGCAAAATATCCTTAAGGAGATCAGCTATGCCGAAAAACACCAAAACCAGAATCGTATTGACGGTCTGAATAAAGCCC
TGAGTGAAGTCCGGGCCAACTGTTCAGATAGCCAGCTGCGTGCCGATCATCAGAAGAAAATCGCAAAGCAGAAAGATGAG
GTGGCGGAACGCCAGCAAGATTTAGCCGAGGCGAAGCAAAAAGGCGATGCCGATAAGATTGCCAAACGCGAACGGAAACT
GGCAGAAGCGCAGGAAGAGCTGAAAAAGCTGGAAGCGCGCGACTACTAA

Upstream 100 bases:

>100_bases
AACTGTCTATGATTAATGAGGCGGTGGTTAACACTACCGCTTCGTTGTCTGGACAATCGTTCCTTTGTAATAGGTCCGAA
TCACAATGGAAGGTTCAAGA

Downstream 100 bases:

>100_bases
CTCACAATAGTCACTACTTACTCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGA
AATCCCTTTCCGATACGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALSEVRANCSDSQLRADHQKKIAKQKDE
VAERQQDLAEAKQKGDADKIAKRERKLAEAQEELKKLEARDY

Sequences:

>Translated_122_residues
MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALSEVRANCSDSQLRADHQKKIAKQKDE
VAERQQDLAEAKQKGDADKIAKRERKLAEAQEELKKLEARDY
>Mature_122_residues
MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALSEVRANCSDSQLRADHQKKIAKQKDE
VAERQQDLAEAKQKGDADKIAKRERKLAEAQEELKKLEARDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082209, Length=122, Percent_Identity=100, Blast_Score=240, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJC_ECOLI (P42616)

Other databases:

- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_003646.1
- RefSeq:   NP_417568.2
- ProteinModelPortal:   P42616
- STRING:   P42616
- EnsemblBacteria:   EBESCT00000002551
- EnsemblBacteria:   EBESCT00000014595
- GeneID:   947622
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5516
- KEGG:   eco:b3097
- EchoBASE:   EB2598
- EcoGene:   EG12742
- eggNOG:   NOG43471
- GeneTree:   EBGT00050000011723
- HOGENOM:   HBG677464
- OMA:   NANCTET
- ProtClustDB:   CLSK880581
- BioCyc:   EcoCyc:G7611-MONOMER
- Genevestigator:   P42616
- InterPro:   IPR009468

Pfam domain/function: PF06476 DUF1090

EC number: NA

Molecular weight: Translated: 13906; Mature: 13906

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALSEVRAN
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
CSDSQLRADHQKKIAKQKDEVAERQQDLAEAKQKGDADKIAKRERKLAEAQEELKKLEAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
DY
CC
>Mature Secondary Structure
MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALSEVRAN
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
CSDSQLRADHQKKIAKQKDEVAERQQDLAEAKQKGDADKIAKRERKLAEAQEELKKLEAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
DY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123