| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is sstT [H]
Identifier: 157162566
GI number: 157162566
Start: 3283497
End: 3284741
Strand: Direct
Name: sstT [H]
Synonym: EcHS_A3272
Alternate gene names: 157162566
Gene position: 3283497-3284741 (Clockwise)
Preceding gene: 157162565
Following gene: 157162570
Centisome position: 70.71
GC content: 54.94
Gene sequence:
>1245_bases ATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGT TCTGGGGATTCTTCTGGCATGGATCTCAAAACCCGCGGCGGAAGCTGTTGGTCTGTTAGGTACTTTGTTCGTCGGCGCAC TGAAAGCTGTTGCCCCCATCCTGGTGTTGATGCTGGTAATGGCATCTATTGCTAACCACCAGCACGGTCAGAAAACCAAT ATCCGCCCTATTTTGTTCCTCTATCTACTGGGCACCTTCTCTGCTGCTCTGGCCGCAGTAGTCTTCAGCTTTGCCTTCCC TTCTACCCTGCATTTATCCAGTAGCGCGGGTGATATTTCGCCGCCGTCAGGCATTGTCGAAGTGATGCGCGGGCTGGTAA TGAGCATGGTTTCCAACCCCATCGACGCGCTGCTGAAAGGTAACTACATCGGGATTCTGGTGTGGGCGATCGGCCTCGGC TTCGCACTGCGTCACGGTAACGAGACCACCAAAAACCTGGTCAACGATATGTCGAATGCCGTCACCTTTATGGTGAAACT GGTCATTCGCTTCGCACCGATTGGTATTTTTGGTCTGGTTTCTTCTACCCTGGCAACCACCGGTTTCTCCACACTGTGGG GCTACGCGCAACTGCTGTTCGTGCTGGTTGGCTGCATGTTAATGGTGGCGCTGGTGGTTAACCCATTGCTGGTGTGGTGG AAAATTCGTCGTAACCCGTTCCCGCTGGTGCTGCTGTGCCTGCGCGAAAGCGGTGTGTATGCCTTCTTCACCCGCAGCTC TGCAGCGAACATTCCGGTGAATATGGCGCTGTGTGAAAAGCTGAATCTGGATCGCGATACCTATTCCGTTTCTATTCCGC TGGGAGCCACCATCAATATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATT CCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGG GTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCT TTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGC CAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAA
Upstream 100 bases:
>100_bases TTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAA CACAATGAAAGGATCGAAAA
Downstream 100 bases:
>100_bases TTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAG AAACGAATGATATTCAGGCC
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTN IRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLFVLVGCMLMVALVVNPLLVWW KIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGI PVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAAC QAEDDRLANSALRN
Sequences:
>Translated_414_residues MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTN IRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLFVLVGCMLMVALVVNPLLVWW KIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGI PVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAAC QAEDDRLANSALRN >Mature_413_residues TTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNI RPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGF ALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLFVLVGCMLMVALVVNPLLVWWK IRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIP VDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQ AEDDRLANSALRN
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=242, Percent_Identity=26.0330578512397, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI21314632, Length=265, Percent_Identity=27.5471698113208, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI223468566, Length=273, Percent_Identity=27.1062271062271, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI169790839, Length=245, Percent_Identity=23.6734693877551, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI5032093, Length=273, Percent_Identity=27.4725274725275, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI223468564, Length=266, Percent_Identity=27.8195488721804, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1789473, Length=414, Percent_Identity=99.5169082125604, Blast_Score=816, Evalue=0.0, Organism=Escherichia coli, GI1789947, Length=353, Percent_Identity=24.3626062322946, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790514, Length=426, Percent_Identity=24.4131455399061, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537407, Length=424, Percent_Identity=23.8207547169811, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71996953, Length=271, Percent_Identity=26.1992619926199, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193206505, Length=267, Percent_Identity=27.3408239700375, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71983106, Length=275, Percent_Identity=24.7272727272727, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983099, Length=275, Percent_Identity=24.7272727272727, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43544; Mature: 43413
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDIS HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC PPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKNLVNDMSNA CCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLFVLVGCMLMVALVVNPLLVWW HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINM HHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEC AGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFG CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHC ISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDDRLANSALRN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHCC >Mature Secondary Structure TTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDIS HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC PPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKNLVNDMSNA CCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLFVLVGCMLMVALVVNPLLVWW HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINM HHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEC AGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFG CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHC ISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDDRLANSALRN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]