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The map label for this gene is ygjQ [H]

Identifier: 157162562

GI number: 157162562

Start: 3279885

End: 3280568

Strand: Direct

Name: ygjQ [H]

Synonym: EcHS_A3268

Alternate gene names: 157162562

Gene position: 3279885-3280568 (Clockwise)

Preceding gene: 157162561

Following gene: 157162563

Centisome position: 70.63

GC content: 50.73

Gene sequence:

>684_bases
ATGCAGCCCCGCCTTCTTCTCCGTATTTGTTTTTCTCGCCGGACTCTTAAGATTGGCTGTTTGTTGTTGCTTATAGCAGG
AGCGACCATTTTTATTGCCGATCGCGTTATGGTCAACGCCAGCAAACAGCTGACCTGGAGCGATGTCAACGCAGTTCCGG
CGCGTAACGTGGGCTTATTGCTGGGGGCCAGGCCGGGTAATCGCTACTTTACCCGACGTATTGATACCGCAGCAGCGTTG
TACCACGCCGGAAAAGTGAAATGGCTACTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCCTCAGGTATGCA
GCAGGCTTTGATCGCTAAAGACGTACCGGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAG
TGCGTGCCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTG
GCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCG
GGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCA
TGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAA

Upstream 100 bases:

>100_bases
TCGCTTGGGCAGGACAAAATCTGAAAATGATGTCAGGCGTTATCTTTTCTTTCTTTAGCGCCTAAAATCGACCTCCCCCC
TTTCGTTAAGGATAACGACC

Downstream 100 bases:

>100_bases
TGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACAGAATCCCTTTATGGAGTATCCACGCGTTAT
GATACGTTTCGCTGTGATTG

Product: putative SanA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAAL
YHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKDVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
AKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK

Sequences:

>Translated_227_residues
MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAAL
YHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKDVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
AKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
>Mature_227_residues
MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAAL
YHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKDVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
AKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK

Specific function: Unknown

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sanA [H]

Homologues:

Organism=Escherichia coli, GI1789468, Length=224, Percent_Identity=98.2142857142857, Blast_Score=457, Evalue=1e-130,
Organism=Escherichia coli, GI1788466, Length=203, Percent_Identity=39.4088669950739, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 25239; Mature: 25239

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLL
CCCHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEHHHEECCCCCEEECCCCCCCCCCCEEE
LGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKDVPAKVI
EECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEE
FCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKH
EECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCEEEEEEHHCCCEEECCCCCCCCCCC
GFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLL
CCCHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEHHHEECCCCCEEECCCCCCCCCCCEEE
LGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKDVPAKVI
EECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEE
FCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKH
EECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCEEEEEEHHCCCEEECCCCCCCCCCC
GFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]