Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is ypfG
Identifier: 157161925
GI number: 157161925
Start: 2603641
End: 2604684
Strand: Reverse
Name: ypfG
Synonym: EcHS_A2595
Alternate gene names: 157161925
Gene position: 2604684-2603641 (Counterclockwise)
Preceding gene: 157161926
Following gene: 157161922
Centisome position: 56.09
GC content: 54.6
Gene sequence:
>1044_bases ATGCGCTATCGCATTTTCCTTCTCTTTTTTTTCGCTTTGTTGCCGACGTCTTTGGTGTGGGCGGCACCAGCGCAACGGGC GTTTTCCGACTGGCAGGTCACCTGTAATAACCAAAATTTCTGCGTGGCGCGTAATACGGGCGATCATAATGGACTGGTGA TGACCCTGAGCCGCAGCGCCGGGGCGCATACCGATGCCGTTTTACGTATTGAGCGCGGCGGATTGAAGTCGCCGGAGGCG TCAGAAGGGGAGATAGCGCCACGGCTGCTGTTAGATGGCGAGCCGTTGGCGTTAAGTGGTGACAAGTGGCGGATTTCACC ATGGTTATTAGTAACCGATGATACGGCAACCATCACCGCGTTTTTGCAGATGATTCAGGAAGGGAAGGCAATCACCTTAC GCGATGGCGATCAGACCATTTCTCTGAGTGGCTTAAAAGCAGCGTTGTTGTTTATTGATGCTCAGCAAAAGCGCGTTGGC AGTGAAACCGCGTGGATCAAGAAAGGGGACGAACCGCCGCTCAGCGTACCGCCCGCGCCTGCGCTGAAAGAGGTCGCGGT GGTTAACCCAACGCCGACGCCACTCTCACTCGAAGAACGCAACGATTTGCTGGATTATGGAAACTGGCGGATGAATGGTC TGCGCTGCTCGCTTGATCCATTGCGTCGTGAGGTGAATGTCACTGCGCTGACTGATGATAAAGCGCTGATGATGATTAGC TGTGAGGCAGGGGCCTATAACACCATTGATTTGGCATGGATTGTGTCGCGTAAAAAGCCACTAGCTTCGCGCCCGGTTCG GTTGCGTTTGCCGTTCAACAACGGTCAGGAGACGAATGAACTGGAACTGATGAACGCAACATTTGATGAGAAATCGCGTG AACTGGTGACCTTAGCGAAAGGGCGCGGATTAAGCGATTGTGGCATTCAGGCGCGCTGGCGCTTTGACGGTCAGCGTTTT CGCCTGGTGCGTTACGCCGCAGAACCCACCTGCGATAACTGGCATGGGCCAGACGCCTGGCCCACGTTGTGGATCACCCG TTAA
Upstream 100 bases:
>100_bases TATTATTGGCTCAATCCGACAAATCCGATTGAGACGCGCTACCTGCGCAACGAAGATACGACTTGTGCTGTTTGTTTGAA CTTCTGGGGTCGTACCGTCC
Downstream 100 bases:
>100_bases ACAAAATGGCGGGACATGTAGGCCGGATAAGACGCTGTAGGCCGGATAAGACGCGTCAGCGTCGCATCCGGCAATCAGCA TCCGGCAATCACCATCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDAWPTLWITR
Sequences:
>Translated_347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDAWPTLWITR >Mature_347_residues MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEA SEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRF RLVRYAAEPTCDNWHGPDAWPTLWITR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788809, Length=347, Percent_Identity=100, Blast_Score=709, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YPFG_ECOLI (P76559)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - PIR: A65022 - RefSeq: AP_003051.1 - RefSeq: NP_416961.1 - ProteinModelPortal: P76559 - IntAct: P76559 - STRING: P76559 - EnsemblBacteria: EBESCT00000002620 - EnsemblBacteria: EBESCT00000018419 - GeneID: 946828 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW2450 - KEGG: eco:b2466 - EchoBASE: EB3946 - EcoGene: EG14194 - eggNOG: NOG08588 - GeneTree: EBGT00050000011107 - HOGENOM: HBG416675 - OMA: GIQTRWR - ProtClustDB: CLSK880400 - BioCyc: EcoCyc:G7295-MONOMER - Genevestigator: P76559 - InterPro: IPR009560
Pfam domain/function: PF06674 DUF1176
EC number: NA
Molecular weight: Translated: 38747; Mature: 38747
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSA CEEEEHHHHHHHHHHHHHEECCCHHHCCCCCEEEECCCCEEEECCCCCCCCEEEEEECCC GAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITA CCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECEEEEEECCCHHHHH FLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAP HHHHHHCCCEEEEECCCCEEEECCCEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC ALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CCCCEEEECCCCCCCCHHCCCCCCCCCCEEECCEEECCHHHCCEEEEEEEECCCEEEEEE CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAK ECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC GRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR CCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSA CEEEEHHHHHHHHHHHHHEECCCHHHCCCCCEEEECCCCEEEECCCCCCCCEEEEEECCC GAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITA CCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECEEEEEECCCHHHHH FLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAP HHHHHHCCCEEEEECCCCEEEECCCEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC ALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CCCCEEEECCCCCCCCHHCCCCCCCCCCEEECCEEECCHHHCCEEEEEEEECCCEEEEEE CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAK ECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC GRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR CCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503