Click here to switch to the map view.

The map label for this gene is yfdX [H]

Identifier: 157161848

GI number: 157161848

Start: 2525172

End: 2525804

Strand: Reverse

Name: yfdX [H]

Synonym: EcHS_A2512

Alternate gene names: 157161848

Gene position: 2525804-2525172 (Counterclockwise)

Preceding gene: 157161849

Following gene: 157161847

Centisome position: 54.39

GC content: 45.81

Gene sequence:

>633_bases
ATGAAACGTTTAATTATGGCTACGATGGTCACAGCAATTCTGGCATCTTCAACTGTATGGGCTGCTGATAATGCACCGGT
AGCGGCACAACAGCAAACTCAGCAAGTTCAGCAAACCCAGAAAACGGCAGCAGCAGAGCGTATCTCTGAACAAGGTTTAT
ATGCGATGCGTGACGTGCAGGTAGCGCGCCTGGCTCTGTTTCATGGCGATCCAGAAAAGGCAAAAGAACTGACCAATGAA
GCTTCCGCTTTGCTGTCAGATGACAGTACCGAATGGGCAAAGTTCGCTAAGCCAGGTAAAAAGACCAATCTCAATGATGA
CCAATATATTGTCATTAATGCATCTGTCGGAATTTCTGAGAGTTATGTAGCAACTCCCGAAAAAGAAGCCGCGATAAAAA
TTGCCAATGAAAAAATGGCGAAAGGGGATAAAAAGGGCGCAATGGAAGAGCTTCGCCTGGCCGGTGTTGGCGTAATGGAA
AACCAATATCTGATGCCACTTAAACAGACTCGTAATGCACTTGCTGATGCGCAGAAACTGCTTGATAAAAAGCAATACTA
CGAGGCAAACCTGGCGCTTAAAGGTGCGGAAGATGGAATCATCGTCGATAGCGAAGCACTGTTTGTGAACTAA

Upstream 100 bases:

>100_bases
GATAACCCTTTCAAAATGACCGTTGCTCTCTGATTTCTCATTTCATGCTCACCCAATATGATGGCGGCGTTTTCTAAAAC
TGTTAAAGAATGAGGTAAGT

Downstream 100 bases:

>100_bases
TGCTGACAGGCAGTATATTGAGGTAAAGGATTTAACTCCCTCCAGCCGACAATTTTTTATGACCACAATACGACAGGTTG
TGGTCATAAAATTATTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNE
ASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN

Sequences:

>Translated_210_residues
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNE
ASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN
>Mature_210_residues
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNE
ASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788719, Length=211, Percent_Identity=99.5260663507109, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021236 [H]

Pfam domain/function: PF10938 YfdX [H]

EC number: NA

Molecular weight: Translated: 22906; Mature: 22906

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAERISEQGLYAMRDVQ
CCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISE
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
SYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKL
CCCCCCCHHHHEEEHHHHHHCCCCCHHHHHHHHHCCCEECCCEECCHHHHHHHHHHHHHH
LDKKQYYEANLALKGAEDGIIVDSEALFVN
HHHHHHHHHCEEEECCCCCEEECCCEEEEC
>Mature Secondary Structure
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAERISEQGLYAMRDVQ
CCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISE
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
SYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKL
CCCCCCCHHHHEEEHHHHHHCCCCCHHHHHHHHHCCCEECCCEECCHHHHHHHHHHHHHH
LDKKQYYEANLALKGAEDGIIVDSEALFVN
HHHHHHHHHCEEEECCCCCEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]