Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

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The map label for this gene is yfcR [H]

Identifier: 157161824

GI number: 157161824

Start: 2492680

End: 2493189

Strand: Reverse

Name: yfcR [H]

Synonym: EcHS_A2487

Alternate gene names: 157161824

Gene position: 2493189-2492680 (Counterclockwise)

Preceding gene: 157161825

Following gene: 157161823

Centisome position: 53.69

GC content: 54.71

Gene sequence:

>510_bases
ATGAGTCACAAGTTTTTAGCGGGCGCGGGGCTACTGGTACTGGCCGGATGGGGTGTCAGCGGTTTAGCCGTTGCTGGCAG
CGATATCAAACAGGTGGATCTGACGCTGCGAATCCTGGTCGATGGCCCGCCGCCGTGCTCCGTGAAGGGAAGCGCGGTGG
AATTTGGCAATGTGGTGATCAACAGGATCGATGGTACCAATTACCAACAGGATGCGAAATACACCCTCAACTGCGGTAAT
AAAGTCAGCGATGACTTACGGATGCAGCTCAAAGGCAATACCGCCGTGATCAACGGAGAAACGGTTCTCAGCACGGATAT
CGCCGGCCTGGGGGTGCGGATAGAAAACGCCGCCGACAACTCCCTGTTTGCAGTTGGTGAAAATAACTGGACGCCTTTTA
ATGTCAACACACAGCCTCAGCTGAAAGCGGTGCCGGTAAAACAGAGCGGGGTGCAACTGACGCCGTCGGAGTTTAACGCC
ACGATGACCATGGTGGTGGATTACCAATGA

Upstream 100 bases:

>100_bases
CGACTACGGCGCGCGGATGCCGCTGTACTTCAAATGCACCGGCAACAACTGCCAGGTGGATGAAGAGCAGAGCCGCAAAG
GCTGATGCCGGGAGGGACTT

Downstream 100 bases:

>100_bases
AAAAATTCCTGCTCCTTTTACTGTGCGCTGGTTGCGGGGCTGTGCTGGCGGCGGAAGATGACATCACATTCCACGGTACG
CTGATGTCGCCGCCCGCCTG

Product: putative minor fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSHKFLAGAGLLVLAGWGVSGLAVAGSDIKQVDLTLRILVDGPPPCSVKGSAVEFGNVVINRIDGTNYQQDAKYTLNCGN
KVSDDLRMQLKGNTAVINGETVLSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNA
TMTMVVDYQ

Sequences:

>Translated_169_residues
MSHKFLAGAGLLVLAGWGVSGLAVAGSDIKQVDLTLRILVDGPPPCSVKGSAVEFGNVVINRIDGTNYQQDAKYTLNCGN
KVSDDLRMQLKGNTAVINGETVLSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNA
TMTMVVDYQ
>Mature_168_residues
SHKFLAGAGLLVLAGWGVSGLAVAGSDIKQVDLTLRILVDGPPPCSVKGSAVEFGNVVINRIDGTNYQQDAKYTLNCGNK
VSDDLRMQLKGNTAVINGETVLSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNAT
MTMVVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=169, Percent_Identity=71.5976331360947, Blast_Score=251, Evalue=2e-68,
Organism=Escherichia coli, GI1788675, Length=147, Percent_Identity=30.6122448979592, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17895; Mature: 17763

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHKFLAGAGLLVLAGWGVSGLAVAGSDIKQVDLTLRILVDGPPPCSVKGSAVEFGNVVI
CCCCEECCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEECCEEE
NRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETVLSTDIAGLGVRIENAADN
EEECCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEECCEEEEECCCEEEEEEECCCCC
SLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNATMTMVVDYQ
CEEEEECCCCCEEECCCCCCEEEECCCCCCCEECHHCCCEEEEEEEEEC
>Mature Secondary Structure 
SHKFLAGAGLLVLAGWGVSGLAVAGSDIKQVDLTLRILVDGPPPCSVKGSAVEFGNVVI
CCCEECCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEECCEEE
NRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETVLSTDIAGLGVRIENAADN
EEECCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEECCEEEEECCCEEEEEEECCCCC
SLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNATMTMVVDYQ
CEEEEECCCCCEEECCCCCCEEEECCCCCCCEECHHCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]