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The map label for this gene is yfcA

Identifier: 157161816

GI number: 157161816

Start: 2486322

End: 2487131

Strand: Reverse

Name: yfcA

Synonym: EcHS_A2479

Alternate gene names: 157161816

Gene position: 2487131-2486322 (Counterclockwise)

Preceding gene: 157161817

Following gene: 157161815

Centisome position: 53.56

GC content: 52.1

Gene sequence:

>810_bases
ATGGAAACGTTTAATAGCCTGTTTATGGTTTCCCCGCTGTTGCTGGGAGTTCTCTTTTTTGTCGCCATGCTGGCGGGATT
TATCGACTCGATTGCCGGTGGCGGTGGGTTACTCACCATTCCGGCATTGATGGCGGCGGGGATGTCTCCCGCTAATGCGC
TGGCAACCAATAAACTGCAAGCCTGCGGCGGCTCTATTTCCGCCACTATCTACTTTATTCGCCGCAAAGTGGTTAGTTTA
AGCGATCAGAAACTCAATATCGCCATGACCTTTGTCGGCTCAATGAGCGGCGCACTGCTGGTGCAATACGTTCAGGCTGA
TGTCTTACGACAGATTTTGCCCATTCTGGTGATTTGTATCGGCCTCTATTTCTTGCTGATGCCAAAATTGGGTGAAGAAG
ATCGCCAGCGCCGGATGTACGGTTTACCCTTCGCGTTAATTGCAGGTGGCTGCGTCGGTTTTTACGACGGATTCTTTGGG
CCAGCTGCCGGATCGTTTTACGCGCTGGCCTTCGTTACGCTGTGCGGATTCAACCTCGCCAAAGCCACGGCTCACGCCAA
ATTACTCAACGCAACGTCAAATATCGGCGGTTTACTGCTGTTTATTCTCGGTGGCAAAGTGATTTGGGCGACGGGCTTTG
TCATGCTGGTGGGGCAGTTCCTCGGCGCGCGCATGGGTTCAAGACTGGTGTTGAGCAAAGGACAAAAACTGATCCGCCCG
ATGATCGTTATCGTCTCGGCGGTGATGAGTGCCAAATTACTTTATGATAGCCACGGACAGGAGATCCTCCACTGGTTGGG
GATGAACTAA

Upstream 100 bases:

>100_bases
GGTTTGAACCTCCAAAACCGGGAACAACAAAGCCTGAGAAGAAGACACCGCCTCCGTTGCCGCCTTCCTGCCAGGCGCTA
CTGGATGAGCACGTGATCTA

Downstream 100 bases:

>100_bases
TGAACAGTACACACCACTATGAGCAGTTGATTGAAATTTTTAATAGCTGCTTTGCCGATGATTTTAATACCCGTCTGATT
AAAGGCGACGACGAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLGMN

Sequences:

>Translated_269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLGMN
>Mature_269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLGMN

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family

Homologues:

Organism=Escherichia coli, GI1788667, Length=269, Percent_Identity=100, Blast_Score=535, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFCA_ECO57 (P0AD32)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C91030
- PIR:   D85874
- RefSeq:   NP_288901.1
- RefSeq:   NP_311238.1
- ProteinModelPortal:   P0AD32
- EnsemblBacteria:   EBESCT00000028348
- EnsemblBacteria:   EBESCT00000055833
- GeneID:   915693
- GeneID:   957506
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3590
- KEGG:   ecs:ECs3211
- GeneTree:   EBGT00050000010704
- HOGENOM:   HBG580184
- OMA:   WAGLPPT
- ProtClustDB:   PRK10621
- BioCyc:   ECOL83334:ECS3211-MONOMER
- InterPro:   IPR002781

Pfam domain/function: PF01925 DUF81

EC number: NA

Molecular weight: Translated: 28644; Mature: 28644

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x154c4120)-; HASH(0x162826e0)-; HASH(0x15300234)-; HASH(0x15a26338)-; HASH(0x15604288)-; HASH(0x14cfda84)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
ACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICI
HCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA
HHHHHHHCCCCCHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHH
KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
MIVIVSAVMSAKLLYDSHGQEILHWLGMN
HHHHHHHHHHHHHHHHCCHHHHHHHHCCH
>Mature Secondary Structure
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
ACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICI
HCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA
HHHHHHHCCCCCHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHH
KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
MIVIVSAVMSAKLLYDSHGQEILHWLGMN
HHHHHHHHHHHHHHHHCCHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796