Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

Click here to switch to the map view.

The map label for this gene is yfbN

Identifier: 157161761

GI number: 157161761

Start: 2429281

End: 2429997

Strand: Reverse

Name: yfbN

Synonym: EcHS_A2422

Alternate gene names: 157161761

Gene position: 2429997-2429281 (Counterclockwise)

Preceding gene: 157161764

Following gene: 157161758

Centisome position: 52.33

GC content: 39.05

Gene sequence:

>717_bases
ATGGAATGGTTAAGTGAAATTCGTAAACTTCGGAAGAACGTACCTGTCGGTATCCAGGTTGCCAGACGTTTGTTAGAGAG
GACTGGCGGTGATGTTGATGAAGCCATCAAGTTGTTTCATATTGACCAAATCAATATATTGACGGCAAAAGCAGACGTCA
CTCATCAGGAAGCAGAGAATGTTTTGTTGGCTACAAACTATGATATTGCAGAAGCTCTTCGGCGTATTGATGAACAACGC
TATACACTGACGGAATTGATTTTGCGTAAAAATAAGGATGCCGGAGATGCCTTAAACAATATAGCATTGGCGATTGAATA
TGAGTGGGATCTCAAGCGTAAGTTTTGGTTTGGTTTTGCAGATATCCAATTATTACCGCCAGTTTTACAAACATTTATGC
TGGTTTATGAATGGCATGAATATGTTGGTTGGGAAGGAATGGAGTGTGGGATATTTTTTGAAAGTGATCATACTCACCAG
CAATTGCAAGCTTTGGGGTTATTAGAACTCGCCCAAAAAATGGTTACTGCAAGAATCCGATATGATGAGCTAAAAGACAA
GGCCGAAAATTTTCACGAGATTACAGAGGATGACATATTCAAAATGCTTATAATACATTGTGACCAACTTGCAAGAGAGG
TTGATTCTATATTACTGCAATTTGTGAAGGACAATATTGATGTTTTCCCGTGTCGCCATAACAGACACGAGTTATAA

Upstream 100 bases:

>100_bases
ACATGAATGTTAAGCAGGAAAACGTGAGATATTCAGTCAGGCCGGGTCGTTATCCAGACGTTGTTATATTTAATATCATA
AATATTTAAAGGGGTTTGAC

Downstream 100 bases:

>100_bases
AAAATAATCCCAAAATTGAACAGGCTTTTTATCTACCTGGTAATGACAGGTTCAATTCCGTTTTCATCAAGCATGACAGA
TCGTTGCCAGCACAGAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQR
YTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQ
QLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL

Sequences:

>Translated_238_residues
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQR
YTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQ
QLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL
>Mature_238_residues
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQR
YTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQ
QLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788609, Length=238, Percent_Identity=100, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFBN_ECOLI (P76484)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G64998
- RefSeq:   AP_002871.1
- RefSeq:   NP_416776.1
- DIP:   DIP-11967N
- STRING:   P76484
- 2DBase-Ecoli:   P76484
- EnsemblBacteria:   EBESCT00000001241
- EnsemblBacteria:   EBESCT00000016520
- GeneID:   946748
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2268
- KEGG:   eco:b2273
- EchoBASE:   EB3851
- EcoGene:   EG14098
- eggNOG:   NOG81096
- GeneTree:   EBGT00050000012117
- HOGENOM:   HBG474645
- OMA:   LAMRINQ
- ProtClustDB:   CLSK891770
- BioCyc:   EcoCyc:G7180-MONOMER
- Genevestigator:   P76484

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27991; Mature: 27991

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAEN
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHCC
VLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFA
EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCCCHHHHCCHH
DIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIR
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
>Mature Secondary Structure
MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAEN
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHCC
VLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFA
EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCCCHHHHCCHH
DIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIR
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503