Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is hisA [H]
Identifier: 157161517
GI number: 157161517
Start: 2140980
End: 2141717
Strand: Direct
Name: hisA [H]
Synonym: EcHS_A2163
Alternate gene names: 157161517
Gene position: 2140980-2141717 (Clockwise)
Preceding gene: 157161516
Following gene: 157161518
Centisome position: 46.11
GC content: 56.78
Gene sequence:
>738_bases ATGATTATTCCGGCATTAGATTTAATCGACGGCACCGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTA CGGTAACGACCCGCTGCCACGCTTACAGGATTACGCCGCGCAGGGTGCCGAAGTGTTGCATCTGGTGGATCTGACCGGGG CAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGC GGCGTGCGTAGCGAAGAAGACGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTGGTGGTTGGCTCCACCGCGGTGAA ATCACCAGAAATGGTGAAAGGCTGGTTTGAACGCTTCGGTGCCGATGCCTTAGTGCTGGCGCTGGATGTCCGTATTGACG AGCAAGGCAACAAGCAGGTGGCAGTCAGCGGCTGGCAAGAGAACTCGGGCGTTTCACTGGAACAACTGGTGGAAACCTAT CTGCCCGTCGGCCTGAAACATGTGCTGTGTACCGATATCTCGCGCGACGGCACGCTGGCAGGTTCTAACGTCTCTTTATA TGAAGAAGTGTGCGCCAGATATCCGCAGGTGGCATTTCAGTCTTCCGGCGGTATTGGCGACATTGATGATGTCGCGGCCC TGCGTGGTACTGGCGTGCGCGGCGTAATAGTTGGTCGTGCATTACTGGAAGGTAAATTCACCGTGAAGGAGGCCATCGCA TGCTGGCAAAACGCATAA
Upstream 100 bases:
>100_bases CCGCGGCGGTACAAAAAGATAACTTCTACGGCGTGCAGTTCCACCCGGAGCGTTCTGGTGCTGCTGGCGCTAATTTGCTG AAAAACTTCCTGGAGATGTG
Downstream 100 bases:
>100_bases TCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATTGTA CCGCTGGCAAAACGCTACGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGG GVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIA CWQNA
Sequences:
>Translated_245_residues MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGG GVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIA CWQNA >Mature_245_residues MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGG GVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIA CWQNA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=99.1836734693878, Blast_Score=485, Evalue=1e-139, Organism=Escherichia coli, GI1788336, Length=231, Percent_Identity=26.4069264069264, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26016; Mature: 26016
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHH QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFG CCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHEEECCHHCCCHHHHHHHHHHHC ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA CCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCC GSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIA CCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH CWQNA HHCCC >Mature Secondary Structure MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHH QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFG CCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHEEECCHHCCCHHHHHHHHHHHC ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA CCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCC GSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIA CCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH CWQNA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA