Click here to switch to the map view.

The map label for this gene is fliO [H]

Identifier: 157161418

GI number: 157161418

Start: 2041244

End: 2041609

Strand: Direct

Name: fliO [H]

Synonym: EcHS_A2047

Alternate gene names: 157161418

Gene position: 2041244-2041609 (Clockwise)

Preceding gene: 157161417

Following gene: 157161419

Centisome position: 43.96

GC content: 54.92

Gene sequence:

>366_bases
ATGAATAACCACGCTACTGTGCAATCTTCCACGCCGGTTTCTGCTGCGCCACTGCTGCAGGTCAGCGGCGCACTCATCGC
CATTATTGCCCTGATCCTCGCTGCTGCCTGGCTGGTAAAACGGTTGGGATTTGCCCCGAAACGCACTGGCGTTAACGGTC
TGAAAATTAGCGCCAGTGCTTCGCTGGGCGCGCGTGAACGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTC
GGCGTTACCGCAGGGCAAATCAATCTGCTGCATAAACTTCCCCCTTCAGCACCAACAGAAGAGATACCGCAGACCGATTT
TCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGTGGGAGATCCTGA

Upstream 100 bases:

>100_bases
TCGCCCAGGGCGAAGTGGTGGTCGTTGCCGATAAATATGGCGTGCGGATCACCGATATCATTACTCCGTCTGAGCGAATG
CGTCGCCTGAGCCGTTAGTG

Downstream 100 bases:

>100_bases
TGCGTCGTTTGTTGTCTGTCGCACCTGTCCTTCTCTGGCTGGTTACGCCCCTCGCCTTCGCGCAACTGCCGGGTATCACC
AGCCAGCCGCTGCCTGGCGG

Product: flagellar biosynthesis protein FliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVEDARLVL
GVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS

Sequences:

>Translated_121_residues
MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVEDARLVL
GVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS
>Mature_121_residues
MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVEDARLVL
GVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliO/mopB family [H]

Homologues:

Organism=Escherichia coli, GI87082005, Length=121, Percent_Identity=99.1735537190083, Blast_Score=237, Evalue=2e-64,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781 [H]

Pfam domain/function: PF04347 FliO [H]

EC number: NA

Molecular weight: Translated: 12700; Mature: 12700

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
SLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGR
CCCCCCCEEEEECCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
S
C
>Mature Secondary Structure
MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
SLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGR
CCCCCCCEEEEECCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8282695; 9097040; 9278503 [H]