| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157161404
Identifier: 157161404
GI number: 157161404
Start: 2029511
End: 2030011
Strand: Direct
Name: 157161404
Synonym: EcHS_A2032
Alternate gene names: NA
Gene position: 2029511-2030011 (Clockwise)
Preceding gene: 157161402
Following gene: 157161409
Centisome position: 43.71
GC content: 42.51
Gene sequence:
>501_bases TTGAATGCCTGTAGTCGTTTCATGGGCCAAATCATACTTTGGCCTATGAAAAAAGAAACCGATATCCGACGCGGAAGGCA TTGTGTTTTCCTGAAGCATGTTCACCTAGTCTTCGTTACTAAATACCGACGTCAGATTTTTGACCATGACGCGACAGAAA AACTACGCACTTACTTTTCAAATGTATGTGCTGATTTTGAAGCTGAACGGGTTGAAATGGATGGCGGACCAGATCACGTC CATTTGTTAATTAACTATCCTCCCAAACTGGCGATATCCAGTCTGGTAAACAGCCTCAAAGGCGTATCGAGTAGGTTACT GCGACGAGATCGACCAGATATTGCAGTCAGGTATTACGACAAAGGCGTTTTGTGGAGTCCTGGCTATTTTGTCAGTAGCT GCATCTTAACGTATCAACTAGATTTAATAACAACGATATCCGTACCTAACCGGATATCTAATGTCATAAGCATCCCTTTA ATTATCCCCTCAACCTCTTGA
Upstream 100 bases:
>100_bases CTCATTCTGAAGCGCCAGAGCACGATTGAAAACGAAACGACATGCGCCTGCGAAGCGCCTCATTTCACGCTCCTGTTGAC CACCTGGTCTTAACCGGAAT
Downstream 100 bases:
>100_bases AACTTTCCCACTCTTGAGCTCCACATAGTCCAAACGCCGGATGCAAAAAAATCACACGTGCATTTCTGAAATTGTGATGG AGGAAGATAGTATCAATTAT
Product: IS605 family transposase
Products: NA
Alternate protein names: Transposase IS; IS Element Transposase; ISSoc3 OrfA Transposase; Transposase-Related Protein; Transposase ORF A; Transposase TnA; Transposase OrfA; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Transposition Helper Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISSoc3 Transposase; Transposase Family Protein A; ISSoc10 OrfA Transposase; Transposase Family Protein; Transposase-Family Protein; Insertion Sequence Transposase; LOW QUALITY PROTEIN IS Element Transposase; Transposase Related Protein; ISCpe2 Transposase OrfA; Transposase Repeat Family IS; Transposase OrfA For Insertion Sequence Element
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNACSRFMGQIILWPMKKETDIRRGRHCVFLKHVHLVFVTKYRRQIFDHDATEKLRTYFSNVCADFEAERVEMDGGPDHV HLLINYPPKLAISSLVNSLKGVSSRLLRRDRPDIAVRYYDKGVLWSPGYFVSSCILTYQLDLITTISVPNRISNVISIPL IIPSTS
Sequences:
>Translated_166_residues MNACSRFMGQIILWPMKKETDIRRGRHCVFLKHVHLVFVTKYRRQIFDHDATEKLRTYFSNVCADFEAERVEMDGGPDHV HLLINYPPKLAISSLVNSLKGVSSRLLRRDRPDIAVRYYDKGVLWSPGYFVSSCILTYQLDLITTISVPNRISNVISIPL IIPSTS >Mature_166_residues MNACSRFMGQIILWPMKKETDIRRGRHCVFLKHVHLVFVTKYRRQIFDHDATEKLRTYFSNVCADFEAERVEMDGGPDHV HLLINYPPKLAISSLVNSLKGVSSRLLRRDRPDIAVRYYDKGVLWSPGYFVSSCILTYQLDLITTISVPNRISNVISIPL IIPSTS
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19112; Mature: 19112
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNACSRFMGQIILWPMKKETDIRRGRHCVFLKHVHLVFVTKYRRQIFDHDATEKLRTYFS CCHHHHHHHHEEECCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NVCADFEAERVEMDGGPDHVHLLINYPPKLAISSLVNSLKGVSSRLLRRDRPDIAVRYYD HHHCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC KGVLWSPGYFVSSCILTYQLDLITTISVPNRISNVISIPLIIPSTS CCCEECCCHHHHHHHHHHHHHHHEEECCCHHHHHHEEEEEEECCCC >Mature Secondary Structure MNACSRFMGQIILWPMKKETDIRRGRHCVFLKHVHLVFVTKYRRQIFDHDATEKLRTYFS CCHHHHHHHHEEECCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NVCADFEAERVEMDGGPDHVHLLINYPPKLAISSLVNSLKGVSSRLLRRDRPDIAVRYYD HHHCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC KGVLWSPGYFVSSCILTYQLDLITTISVPNRISNVISIPLIIPSTS CCCEECCCHHHHHHHHHHHHHHHEEECCCHHHHHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA