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The map label for this gene is ynjB

Identifier: 157161216

GI number: 157161216

Start: 1854155

End: 1855321

Strand: Direct

Name: ynjB

Synonym: EcHS_A1838

Alternate gene names: 157161216

Gene position: 1854155-1855321 (Clockwise)

Preceding gene: 157161215

Following gene: 157161217

Centisome position: 39.93

GC content: 56.38

Gene sequence:

>1167_bases
ATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAA
AAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGA
GCGGCGAGATGAAAACCCATTACGCTATAAACCTGAAGATTGTCCGTCTGGCGGATGCCGCAGACGCGGTGAAGCGCATT
CAGACCGAAGCCGCAGCCGGACGTAAAACGGGCGGCTCGGTGGATCTGCTCTGGGTGAACGGCGAAAACTTCCGCACCTT
AAAAGAGGCCAATTTATTACAAACGGGCTGGGCGGAGACTCTGCCCAACTGGCGCTATGTCGACACACAGCTGCCGGTGC
GGGAAGATTTTTCTGTGCCGACACAAGGTGCGGAATCGCCCTGGGGCGGCGCACAACTGACGTTTATCGCCCGCCGCGAT
GTTACGCCACAGCCACCACAAACGCCGCAAGCCTTACTGGAGTTTGCTAAAGCCAATCCCGGCACGGTTACCTATCCGCG
CCCACCGGACTTTACCGGCACGGCGTTTCTTGAACAGTTGCTGATTATGCTGACGCCCGATCCCGCCGCATTAAAAGAAG
CGCCGGACGATGCGACTTTCGCCCGTGTCACTGCTCCCTTGTGGCAATATCTTGATGTGCTGCATCCGTATTTGTGGCGC
GAAGGAAAGGATTTCCCGCCTTCACCCGCGCGGATGGATGCTCTGCTGAAAGCCGGCACATTGCGCCTGTCGCTGACCTT
TAACCCCGCGCATGCGCAGCAAAAAATCGCCAGCGGCGATTTGCCTGCAAGCAGTTACAGTTTTGGCTTTCGCGAGGGGA
TGATTGGCAACGTGCATTTCGTCACCATTCCTGCCAACGCGAATGCCAGTGCTGCGGCGAAGGTAGTTGCCAATTTCCTG
CTCTCACCCGATGCGCAACTGCGTAAAGCAGATCCCGCTGTCTGGGGCGATCCTTCTGTTCTCGATCCGCAAAAACTGCC
TGACGGGCAGCGCGAATCATTGCAATCAAGAATGCCGCAGGATCTGCCGCCGGTACTGGCTGAACCGCACGCAGGTTGGG
TAAATGCGCTGGAACAAGAATGGCTACACCGTTACGGTACGCATTAA

Upstream 100 bases:

>100_bases
GATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAA
AACGTTCTTAAGGAGAGATG

Downstream 100 bases:

>100_bases
TCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCTCACGCTGATATCGCCTGCTTTG
TCGTTGACACACTGGCAGGC

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRI
QTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWR
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFL
LSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQDLPPVLAEPHAGWVNALEQEWLHRYGTH

Sequences:

>Translated_388_residues
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRI
QTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWR
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFL
LSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQDLPPVLAEPHAGWVNALEQEWLHRYGTH
>Mature_388_residues
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRI
QTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWR
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFL
LSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQDLPPVLAEPHAGWVNALEQEWLHRYGTH

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=388, Percent_Identity=100, Blast_Score=792, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNJB_ECOLI (P76223)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   B64935
- RefSeq:   AP_002373.1
- RefSeq:   NP_416268.2
- ProteinModelPortal:   P76223
- DIP:   DIP-12779N
- STRING:   P76223
- EnsemblBacteria:   EBESCT00000003770
- EnsemblBacteria:   EBESCT00000016069
- GeneID:   946271
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5284
- KEGG:   eco:b1754
- EchoBASE:   EB3760
- EcoGene:   EG14004
- eggNOG:   COG4134
- GeneTree:   EBGT00050000009581
- HOGENOM:   HBG304972
- OMA:   PGRFTYP
- ProtClustDB:   PRK11622
- BioCyc:   EcoCyc:G6949-MONOMER
- Genevestigator:   P76223
- InterPro:   IPR006059

Pfam domain/function: PF01547 SBP_bac_1

EC number: NA

Molecular weight: Translated: 42845; Mature: 42845

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEE
YAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAET
EEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCHHHH
LPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANP
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCC
GTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWR
CEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHF
CCCCCCCCHHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEE
VTIPANANASAAAKVVANFLLSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQ
EEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCC
DLPPVLAEPHAGWVNALEQEWLHRYGTH
CCCCHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEE
YAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAET
EEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCHHHH
LPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANP
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCC
GTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWR
CEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHF
CCCCCCCCHHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEE
VTIPANANASAAAKVVANFLLSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQ
EEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCC
DLPPVLAEPHAGWVNALEQEWLHRYGTH
CCCCHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384