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The map label for this gene is ydjY

Identifier: 157161213

GI number: 157161213

Start: 1852198

End: 1852875

Strand: Direct

Name: ydjY

Synonym: EcHS_A1835

Alternate gene names: 157161213

Gene position: 1852198-1852875 (Clockwise)

Preceding gene: 157161212

Following gene: 157161214

Centisome position: 39.89

GC content: 48.23

Gene sequence:

>678_bases
ATGTTGCAACATTATTCAGTGTCATGGAAAAAAGGACTGGCTGCACTCTGTTTACTGGCTGTTGCTGGGCTTAGCGGCTG
CGATCAACAAGAGAATGCGGCGGCAAAAGTGGAATACGACGGACTTTCGAACAGCCAACCGCTGCGTGTCGATGCCAATA
ACCATACGGTAACCATGCTGGTGCAAATTAATGGTCGTTTCCTCACCGACGACACTCGTCACGGTATTGTGTTTAAAGAT
GGCTCCAACGGACATAAATCGCTGTTTATGGGTTATGCGACCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGTGG
TACGCCGGGCGAAAACATGACGATGGATAATAAAGAAACGACTCATGTCACAGGCAGCAAACTGGATATTTCGGTCAACT
GGCAAGGGGCGGCAAAAGCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTGGC
GGTAATTTAACGGCAGCAGAAGAGAAGAAAACGGGTTGCCTAGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGCAA
TGCAACATACACTTATGGTGCGGTTGAAAAACGTGGTGAAGTTAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATA
ACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAA

Upstream 100 bases:

>100_bases
CTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCC
AAAAAATGAAGGATAGAACG

Downstream 100 bases:

>100_bases
AGCCAGGATAAAGGATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCT
ATGCTGCTGGCATGGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE

Sequences:

>Translated_225_residues
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE
>Mature_225_residues
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain

Homologues:

Organism=Escherichia coli, GI87081965, Length=225, Percent_Identity=100, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDJY_ECOLI (P76220)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G64934
- RefSeq:   AP_002370.1
- RefSeq:   NP_416265.4
- STRING:   P76220
- EnsemblBacteria:   EBESCT00000001968
- EnsemblBacteria:   EBESCT00000017266
- GeneID:   946248
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5283
- KEGG:   eco:b1751
- EchoBASE:   EB3757
- EcoGene:   EG14001
- eggNOG:   NOG70266
- GeneTree:   EBGT00050000009627
- HOGENOM:   HBG467052
- OMA:   WICLLRA
- ProtClustDB:   CLSK880180
- BioCyc:   EcoCyc:G6946-MONOMER
- Genevestigator:   P76220
- InterPro:   IPR017896

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24125; Mature: 24125

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKET
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC
>Mature Secondary Structure
MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKET
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503