Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is cfa
Identifier: 157161127
GI number: 157161127
Start: 1763437
End: 1764585
Strand: Direct
Name: cfa
Synonym: EcHS_A1741
Alternate gene names: 157161127
Gene position: 1763437-1764585 (Clockwise)
Preceding gene: 157161126
Following gene: 157161129
Centisome position: 37.98
GC content: 48.13
Gene sequence:
>1149_bases ATGAGTTCATCGTGTATAGAAGAAGTCAGCGTACCGGATGACAACTGGTACCGTATCGCCAACGAATTACTTAGCCGTGC CGGTATAGCCATTAACGGTTCTGCCCCGGCGGATATTCGTGTGAAAAACCCCGATTTTTTTAAACGCGTTCTGCAAGAAG GCTCTTTGGGGTTAGGCGAAAGTTATATGGATGGCTGGTGGGAATGTGACCGACTGGATATGTTTTTTAGCAAAGTCTTA CGCGCAGGTCTCGAGAACCAACTCCCCCATCATTTCAAAGACACGCTGCGTATTGCCGGCGCTCGTCTCTTCAATCTGCA GAGTAAAAAACGTGCCTGGATAGTCGGCAAAGAGCATTACGATTTGGGTAATGACTTGTTCAGCCGCATGCTTGATCCCT TCATGCAATATTCCTGCGCTTACTGGAAAGATGCCGATAATCTGGAATCTGCCCAGCAGGCGAAGCTCAAAATGATTTGT GAAAAATTGCAGTTAAAACCAGGGATGCGCGTACTGGATATTGGCTGCGGCTGGGGCGGACTGGCACACTACATGGCATC TAATTATGACGTAAGCGTGGTGGGCGTCACCATTTCTGCCGAACAGCAAAAAATGGCTCAGGAACGCTGTGAAGGCCTGG ATGTCACCATTTTGCTGCAAGATTATCGTGACCTGAACGACCAGTTTGATCGTATTGTTTCTGTGGGGATGTTCGAGCAC GTCGGACCGAAAAATTACGATACCTATTTTGCGGTGGTGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATAC TATCGGTTCGAAAAAAACCGATCTGAATGTTGATCCCTGGATTAACAAATATATTTTTCCGAACGGTTGCCTGCCCTCTG TACGCCAGATTGCTCAATCCAGCGAACCCCACTTTGTGATGGAAGACTGGCATAACTTCGGTGCTGATTACGATACTACG TTGATGGCGTGGTATGAACGATTCCTCGCCGCATGGCCAGAAATTGCGGATAACTACAGTGAACGCTTTAAACGAATGTT TACCTATTATCTGAATGCCTGTGCTGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTG TTGAAAACGGCCTTCGAGTGGCTCGCTAA
Upstream 100 bases:
>100_bases GATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCAC CGACCAGTGATGGAGAAACT
Downstream 100 bases:
>100_bases AGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTACCTGGTTGATTCATGGCATTTTCTCGTG CCGCCAGCACACGTTCTACC
Product: cyclopropane fatty acyl phospholipid synthase
Products: NA
Alternate protein names: CFA synthase; Cyclopropane fatty acid synthase
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVL RAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEH VGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTT LMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
Sequences:
>Translated_382_residues MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVL RAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEH VGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTT LMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR >Mature_381_residues SSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLR AGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICE KLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHV GPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTL MAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
Specific function: Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CFA/CMAS family
Homologues:
Organism=Escherichia coli, GI1787951, Length=382, Percent_Identity=100, Blast_Score=800, Evalue=0.0, Organism=Caenorhabditis elegans, GI133904226, Length=385, Percent_Identity=30.9090909090909, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CFA_ECOL6 (P0A9H8)
Other databases:
- EMBL: AE014075 - RefSeq: NP_753950.1 - ProteinModelPortal: P0A9H8 - SMR: P0A9H8 - EnsemblBacteria: EBESCT00000041715 - GeneID: 1036202 - GenomeReviews: AE014075_GR - KEGG: ecc:c2055 - GeneTree: EBGT00050000011613 - HOGENOM: HBG687502 - OMA: GPKNYAT - ProtClustDB: PRK11705 - BRENDA: 2.1.1.79 - GO: GO:0005737 - InterPro: IPR003333 - PIRSF: PIRSF003085
Pfam domain/function: PF02353 CMAS
EC number: =2.1.1.79
Molecular weight: Translated: 43909; Mature: 43778
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: ACT_SITE 354-354
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGE CCCHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCHHHHHHHHHCCCCCCCC SYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHY HHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHC DLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH LAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEH HHHHHHCCCCEEEEEEEECHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH VGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQS CCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCC SEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRA CCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIQLWQVVFSRGVENGLRVAR HHHHHHHHHHHHCHHCCCCCCC >Mature Secondary Structure SSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGE CCHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCHHHHHHHHHCCCCCCCC SYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHY HHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHC DLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH LAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEH HHHHHHCCCCEEEEEEEECHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH VGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQS CCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCC SEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRA CCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIQLWQVVFSRGVENGLRVAR HHHHHHHHHHHHCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157