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The map label for this gene is ydeJ [H]

Identifier: 157161013

GI number: 157161013

Start: 1647840

End: 1648358

Strand: Direct

Name: ydeJ [H]

Synonym: EcHS_A1627

Alternate gene names: 157161013

Gene position: 1647840-1648358 (Clockwise)

Preceding gene: 157161010

Following gene: 157161015

Centisome position: 35.49

GC content: 49.52

Gene sequence:

>519_bases
GTGAACATTAATAAAGATAAAAATGTACAACTCGCAGATACCGACACTATTGAAAACCTGACATCCGCGTTGAGTCAAAG
ACTTATCGCGGATCAATTACGCTTAACTACCGCCGAATCATGCACCGGCGGTAAGTTGGCTAGCGCCCTGTGTGCAGCTG
AAGATACACCCAAATTTTACGGTGCAGGCTTTGTTACTTTCACCGATCAGGCAAAGATGAAAATCCTCAGCGTAAGCCAG
CAATCTCTTGAACGATATTCTGCGGTGAGTGAGAAAGTGGCAGCAGAAATGGCAACAGGTGCCATAGAGCGTGCGGATGC
TGATGTCAGTATTGCCATTACCGGCTACGGCGGATCGGAGGGCGGTGAAGATGGTACGCCAGCGGGTACCGTCTGGTTCG
CGTGGCATATTAAAGGCCAGACCTACACTGCGGTTATGCATTTTGCTGGCGACTGCGAAACGGTATTAGCTTTAGCGGTG
AGGTTTGCCCTCGTCCAGCTGCTGCAATTACTGCTATAA

Upstream 100 bases:

>100_bases
TTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATAT
AATAGCGTGGACAAAAAACA

Downstream 100 bases:

>100_bases
CCAGGCTGGCCTGGCGATATCTCCAGGCCAGCCATTGGTGGTGTTTATATGTTCAAGCCACGATGTTGCAGCATCGGCAT
AATCTGAGGAGCCTTACCGC

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNINKDKNVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQ
QSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGSEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAV
RFALVQLLQLLL

Sequences:

>Translated_172_residues
MNINKDKNVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQ
QSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGSEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAV
RFALVQLLQLLL
>Mature_172_residues
MNINKDKNVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQ
QSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGSEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAV
RFALVQLLQLLL

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1787818, Length=162, Percent_Identity=96.9135802469136, Blast_Score=323, Evalue=3e-90,
Organism=Escherichia coli, GI1789052, Length=163, Percent_Identity=36.8098159509202, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 18271; Mature: 18271

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKDKNVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFY
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHH
GAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGSE
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFALVQLLQLLL
CCCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNINKDKNVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFY
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHH
GAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGSE
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFALVQLLQLLL
CCCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]