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The map label for this gene is ybfL [H]

Identifier: 157160936

GI number: 157160936

Start: 1549039

End: 1549830

Strand: Direct

Name: ybfL [H]

Synonym: EcHS_A1544

Alternate gene names: 157160936

Gene position: 1549039-1549830 (Clockwise)

Preceding gene: 157160935

Following gene: 157160937

Centisome position: 33.36

GC content: 38.64

Gene sequence:

>792_bases
ATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATC
GGATATTCTACTGTTAACTATTTGTGCCGTTATTTCTGGTGCAGAGGGTTGGGAAGATATAGAGGATTTTGGGGAAATAC
ATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGAGTTGTATCCTGT
ATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGC
AATTGATGGAAAAACGCTCCGGCATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAA
CAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGATAAATCTAATGAGATTACAGCTATCCCAGAACTTCTTAAC
ATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATAGCAGAGAAGATACAAAAACA
GGGAGGTGATTATTTATTCGCGGTGAAAGGAAACCAGGGGTGGCTAAATAAAGTCTTTGAGGAAAAGTTTCCGCTGAAAG
AATTAAATAATCCAGAGCATGACAGTTACGCAATTTGTGAAAAGAGTCACGGCAGAGAAGAAATCCGTATTCATATTGTT
TGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAA

Upstream 100 bases:

>100_bases
GCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTAAAGCTGTTTTTTATTGCTTATACATGATCAAATACTTCTT
ACATAATTAAGGAGAACAAA

Downstream 100 bases:

>100_bases
TTTTACTGACATCTTTCAAAAGGAGCACAATCATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAA
CAAAAAGCAGCACTTGCTGC

Product: ISEc1, transposase

Products: NA

Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGEIHLDFLKQYGDFENGIPVHDTIARVVSC
ISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDDKSNEITAIPELLN
MLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGWLNKVFEEKFPLKELNNPEHDSYAICEKSHGREEIRIHIV
CDVPDELIDFTFEWKGLKIHNVC

Sequences:

>Translated_263_residues
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGEIHLDFLKQYGDFENGIPVHDTIARVVSC
ISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDDKSNEITAIPELLN
MLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGWLNKVFEEKFPLKELNNPEHDSYAICEKSHGREEIRIHIV
CDVPDELIDFTFEWKGLKIHNVC
>Mature_263_residues
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGEIHLDFLKQYGDFENGIPVHDTIARVVSC
ISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDDKSNEITAIPELLN
MLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGWLNKVFEEKFPLKELNNPEHDSYAICEKSHGREEIRIHIV
CDVPDELIDFTFEWKGLKIHNVC

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1789896, Length=258, Percent_Identity=96.8992248062015, Blast_Score=519, Evalue=1e-149,
Organism=Escherichia coli, GI1787733, Length=258, Percent_Identity=95.7364341085271, Blast_Score=514, Evalue=1e-147,
Organism=Escherichia coli, GI1786924, Length=253, Percent_Identity=93.2806324110672, Blast_Score=480, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 30095; Mature: 30095

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGEIHLDFLKQ
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKS
HCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHH
RRRGAIHVISAFSTMHSLVIGQIKTDDKSNEITAIPELLNMLDIKGKIITTDAMGCQKDI
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHH
AEKIQKQGGDYLFAVKGNQGWLNKVFEEKFPLKELNNPEHDSYAICEKSHGREEIRIHIV
HHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCEEHHHCCCCCCEEEEEEE
CDVPDELIDFTFEWKGLKIHNVC
ECCCHHHHCCEEEECCEEECCCC
>Mature Secondary Structure
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGEIHLDFLKQ
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKS
HCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHH
RRRGAIHVISAFSTMHSLVIGQIKTDDKSNEITAIPELLNMLDIKGKIITTDAMGCQKDI
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHH
AEKIQKQGGDYLFAVKGNQGWLNKVFEEKFPLKELNNPEHDSYAICEKSHGREEIRIHIV
HHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCEEHHHCCCCCCEEEEEEE
CDVPDELIDFTFEWKGLKIHNVC
ECCCHHHHCCEEEECCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503 [H]