Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is paaB [H]
Identifier: 157160871
GI number: 157160871
Start: 1478061
End: 1478348
Strand: Direct
Name: paaB [H]
Synonym: EcHS_A1476
Alternate gene names: 157160871
Gene position: 1478061-1478348 (Clockwise)
Preceding gene: 157160870
Following gene: 157160872
Centisome position: 31.83
GC content: 49.65
Gene sequence:
>288_bases ATGAGTAATGTTTACTGGCCGTTATACGAAGTTTTCGTGCGTGGCAAACAGGGCTTATCACACCGCCATGTTGGCAGTTT ACATGCTGCCGATGAGCGGATGGCACTGGAAAATGCCCGTGATGCTTACACCCGTCGTAGCGAAGGATGTTCAATTTGGG TGGTGAAGGCGAGTGAAATTGTTGCCTCGCAACCGGAAGAACGCGGTGAATTTTTTGATCCGGCTGAAAGCAAGGTCTAT CGCCATCCAACGTTTTACTCCATCCCTGATGGCATTGAGCACATGTGA
Upstream 100 bases:
>100_bases CCAAACGTAAAGCCTGGGAAGAAGGTACCTGGGTACGGGAAGCAGCGCTGGCCCATGCACAAAAACAACATGCCCGTAAG GTCGCATAAGGAGATTCAAA
Downstream 100 bases:
>100_bases GGTTGGAAATGAATCAGTTAACGGCTTACACCTTGCGCCTGGGCGATAACTGCCTGGTGCTCTCCCAGCGGTTGGGGGAA TGGTGCGGTCATGCACCGGA
Product: phenylacetate-CoA oxygenase subunit PaaB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVY RHPTFYSIPDGIEHM
Sequences:
>Translated_95_residues MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVY RHPTFYSIPDGIEHM >Mature_94_residues SNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYR HPTFYSIPDGIEHM
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3460
COG function: function code Q; Uncharacterized enzyme of phenylacetate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787655, Length=95, Percent_Identity=98.9473684210526, Blast_Score=199, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009359 [H]
Pfam domain/function: PF06243 PaaB [H]
EC number: NA
Molecular weight: Translated: 10928; Mature: 10797
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEI CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHH VASQPEERGEFFDPAESKVYRHPTFYSIPDGIEHM HHCCCHHCCCCCCCCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure SNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEI CCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHH VASQPEERGEFFDPAESKVYRHPTFYSIPDGIEHM HHCCCHHCCCCCCCCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]