Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is ycjX
Identifier: 157160832
GI number: 157160832
Start: 1431568
End: 1432965
Strand: Direct
Name: ycjX
Synonym: EcHS_A1436
Alternate gene names: 157160832
Gene position: 1431568-1432965 (Clockwise)
Preceding gene: 157160830
Following gene: 157160833
Centisome position: 30.83
GC content: 54.43
Gene sequence:
>1398_bases ATGAAGCGACTTAAAAATGAACTCAATGCGCTGGTGAATCGGGGTGTCGACAGACATCTGCGCCTCGCTGTAACCGGACT TAGCCGCAGCGGCAAAACAGCGTTTATCACCGCGATGGTTAATCAGTTGCTTAATATTCACGCCGGAGCACGTTTGCCGC TGTTAAGTGCGGTGCGTGAAGAGCGCCTGCTGGGCGTGAAACGCATTCCCCAGCGTGACTTTGGCATTCCGCGCTTCACC TATGACGAAGGGCTGGCGCAGTTATATGGCGATCCACCCGCCTGGCCAACGCCAACGCGCGGCGTCAGTGAAATCCGCCT GGCGCTACGTTTTAAATCGAATGATTCGCTGCTACGCCACTTTAAGGATACCTCCACGCTGTATCTGGAAATTGTGGATT ATCCCGGCGAATGGTTGCTCGACCTGCCGATGCTGGCGCAGGACTATTTAAGCTGGTCGCGCCAGATGACGGGCTTACTC AATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAA CCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTG GGCGCTTTGTCTTGCCGGGAGATATGGCAGGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGC GAGTCCAAACTGGCGCAGGCCGATAAGCATACCAATGCCGGAATGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGT GGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACA GTGGGCCACAGGCATTTAATGATATGCGTCTGGCACTGACGCAGCTGATGCAAAGTTTTCACTACGGGCAGCGTACCCTG TTCCGGCGTTTGTTTTCGCCGGTTATCGATAAGCTATTGTTTGCTGCCACTAAAGCGGACCATGTGACCATCGATCAGCA CGCTAATATGGTTTCATTACTGCAACAACTGATTCAGGATGCCTGGCAAAATGCGGCGTTCGAAGGGATCAGCATGGACT GCCTGGGGCTGGCGTCAGTTCAGGCGACCACCAGCGGCATTATTGATGTTAACGGTGAGAAAATCCCGGCGCTGCGTGGT AATCGACTTAGCGATGGCGCACCGCTCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGA TAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGCAGGTGATGGATGTCGACAAACCACTACCGCATATTCGTCTTGATG CTGCGCTGGAATTTTTAATAGGAGATAAATTGCGATGA
Upstream 100 bases:
>100_bases CGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTT CAGAGCAGCACAGGACAGCA
Downstream 100 bases:
>100_bases CCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCAGCAGACC TTTGACGAAAATCAGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFT YDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL NGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWG ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTL FRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRG NRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
Sequences:
>Translated_465_residues MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFT YDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL NGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWG ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTL FRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRG NRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR >Mature_465_residues MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFT YDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL NGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWG ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTL FRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRG NRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637
Homologues:
Organism=Escherichia coli, GI1787581, Length=465, Percent_Identity=100, Blast_Score=958, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YCJX_ECOLI (P76046)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - PIR: D64881 - RefSeq: AP_001948.1 - RefSeq: NP_415837.1 - DIP: DIP-11615N - STRING: P76046 - EnsemblBacteria: EBESCT00000002742 - EnsemblBacteria: EBESCT00000015464 - GeneID: 945872 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1314 - KEGG: eco:b1321 - EchoBASE: EB3680 - EcoGene: EG13921 - eggNOG: COG3106 - GeneTree: EBGT00050000008996 - HOGENOM: HBG296548 - OMA: ILFAATK - ProtClustDB: CLSK863080 - BioCyc: EcoCyc:G6659-MONOMER - Genevestigator: P76046 - InterPro: IPR007413
Pfam domain/function: PF04317 DUF463
EC number: NA
Molecular weight: Translated: 52610; Mature: 52610
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVRE CHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH ERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRH HHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCHHHHHH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDP HCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC LAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWG CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCEEECCCCCCCCCC ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHH AWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARL HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCC PGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR CCCHHHCCCCCEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVRE CHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH ERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRH HHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCHHHHHH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDP HCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC LAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWG CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCEEECCCCCCCCCC ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHH AWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARL HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCC PGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR CCCHHHCCCCCEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503