Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is yciQ [H]
Identifier: 157160773
GI number: 157160773
Start: 1371803
End: 1373698
Strand: Direct
Name: yciQ [H]
Synonym: EcHS_A1377
Alternate gene names: 157160773
Gene position: 1371803-1373698 (Clockwise)
Preceding gene: 157160772
Following gene: 157160774
Centisome position: 29.54
GC content: 46.94
Gene sequence:
>1896_bases ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCAGAAAACACGGA GATCCCTTCTTATGAAGAAGGGATTTCGCTCTTTGATGTTGAAGCCACTCTGCAACCGGATGGGGTGCTCGACATCAAAG AAAATATTCATTTTCAGGCGCGAAATCAGCAGATTAAACACGGATTTTATCGTGATTTACCACGACTCTGGATGCAGCCT GATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTG GCATATCGGGTTAATGATTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATT ATCAGGTTAAAAATGCTTTCCTGCGTGAGGGAGATTCAGATCTGTTAATCTGGAACGTGACTGGTAACCACTGGCCGTTT GAAATCTATAAGACCCGATTTTCACTCAAGTTCCCTGATATCGCGGGTAATCCATTTAGCGAAATCGATCTCTTTACTGG AGAAGAGGGCGACACATATCGAAATGGCCGCATCTTTGAGGACGGAAGAATTGAATCCAGCGATCCGTTTTATCGTGAAG ATTTCACGGTACTCTACCGCTGGCCTCACGCTTTACTCAGCAATGCCCCGGCTCCACAAACGACGAATATTTTCAGCCAT ATTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTATTCCTGGTTTGTGGATGGTTATATCTCTGGAA GCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACGCCCGGCATGTTACGTC TCGATGCGAAGCTGGTTTACGACGATAAAGGTTTCTGTGCCGATATCGTAAATCTGATCGTGAAGGGAAAAATTCATCTG GAAGATCAGTATGATAAGAACCAGCAAATCCTGATTTGTGTTAATGAAGGCGCGACCAGAAATAATGAGGTATTACTGCC CGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGACTCTTAC GCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGCCTGATACGTTTTTGCAA TGGGGTGGACTGGCAATATTGGCGGTCATTCTCTGCGGTAACCTGAGTCCCGTAGGTTGGGCAGGAATGAGTCTGGTAGG CGATATGTTTATTATGATCTGCTGGATTATTCCTTTTTTATTTTGTTCCCTTGAGCTTTTATTTGCCCGCGATGATGACA AGCCTTGCGTTAATCGTGCAATCATCACTTTGTATTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTATATC AATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTAGCGCTGTTTGCCTGACCGGTTATCTCACTGG CATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGGCAGCAACGTTATGCCCGCGGTGAAGCTATCGTTAACTATC TTGCGCGTAAAGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGT TGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGA GATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTT ATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAA
Upstream 100 bases:
>100_bases GGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTG CGTTCCACGGATGGAAGACT
Downstream 100 bases:
>100_bases TTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACG TCGAGTCGTTTACTTAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMIIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRIFEDGRIESSDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH ILLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQILICVNEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRLLRRAFLRMQKFYLPRKKSSFYRPDTFLQ WGGLAILAVILCGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRAIITLYLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVCLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW
Sequences:
>Translated_631_residues MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMIIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRIFEDGRIESSDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH ILLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQILICVNEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRLLRRAFLRMQKFYLPRKKSSFYRPDTFLQ WGGLAILAVILCGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRAIITLYLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVCLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW >Mature_630_residues AGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPD GDAALLNYHIVGVTRDGIPEPWHLDWHIGLMIIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFE IYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRIFEDGRIESSDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSHI LLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLE DQYDKNQQILICVNEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRLLRRAFLRMQKFYLPRKKSSFYRPDTFLQW GGLAILAVILCGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRAIITLYLPLICSGVAFYSLYIN VGDVFFYWYMPAGYFSAVCLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGW AISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=615, Percent_Identity=97.0731707317073, Blast_Score=1204, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 71340; Mature: 71209
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMIIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEECCCH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLKFPDIAGNPFS HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC EIDLFTGEEGDTYRNGRIFEDGRIESSDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHH ILLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQILICVNEGATRNNEVLLPAEQLLLEALFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGRRNRLLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGLAILAVILCGNLSPVGW CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRAIITLYLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEE NVGDVFFYWYMPAGYFSAVCLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTH HCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHCCCHHHHCCEEEEEEEC LSCGANTSLLGRSYSGGGAGGGAGGGGGGGW CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMIIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEECCCH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLKFPDIAGNPFS HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC EIDLFTGEEGDTYRNGRIFEDGRIESSDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHH ILLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQILICVNEGATRNNEVLLPAEQLLLEALFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGRRNRLLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGLAILAVILCGNLSPVGW CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRAIITLYLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEE NVGDVFFYWYMPAGYFSAVCLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTH HCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHCCCHHHHCCEEEEEEEC LSCGANTSLLGRSYSGGGAGGGAGGGGGGGW CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]