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The map label for this gene is ychO [H]

Identifier: 157160729

GI number: 157160729

Start: 1322223

End: 1323617

Strand: Direct

Name: ychO [H]

Synonym: EcHS_A1329

Alternate gene names: 157160729

Gene position: 1322223-1323617 (Clockwise)

Preceding gene: 157160728

Following gene: 157160732

Centisome position: 28.47

GC content: 50.68

Gene sequence:

>1395_bases
TTGAGCCGTTTCGTTCCTCGCATTATTTCGTTTTATTTACTCTTGCTGGCGGCAGGCGGTACAGCTAACGCACAATCTAC
CTTCGAGCAAAAAGCGGCAAATCCCTTTGATAATAACAATGATGGTCTGCCGGATTTAGGCATGGCACCTGAAAATCATG
ATGGGGAAAAACACTTTGCTGAAATTGTGAAAGATTTCGGCGAAACCAGTATGAATGATAACGGGCTGGATACTGGCGAG
CAGGCAAAAGCTTTCGCATTGGGAAAAGTCCGCGACGCGCTTAGTCAACAGGTTAATCAGCACGTAGAGTCCTGGCTATC
ACCGTGGGGAAATGCCAGTGTTGATGTCAAAGTGGATAACGAAGGTCATTTTACCGGCAGTCGTGGAAGCTGGTTTGTGC
CGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATGATGGGTTGGTGAGCAATGTG
GGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCT
TCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGACTATCGGCAAACTTTTATCAGCCATTTGCTGCAT
GGCATGAACAGACAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCCCGGATGCGCATGCCGTTCTAT
CAACACCTCAATACCAGTGTCAGCGTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACGGGTTATCA
CAATCCCGTCGCGTTGAGTCTGGGATTAAATTACACCCCTGTGCCATTAGTCACTGTGACGGCCCAGCATAAACAGGGTG
AAAGTGGCGAGAATCAAAATAACCTCGGGCTGAATCTTAATTACCGCTTTGGTGTACCGCTCAAAAAACAACTTTCTGCG
GGCGAGGTTGCCGAAAGTCAGTCGTTACGTGGTAGTCGCTATGATAATCCGCAGCGAAATAATCTACCGACTCTTGAGTA
CCGACAGCGAAAAACGTTAACGGTGTTTCTGGCGACACCGCCGTGGGATCTAAAACCTGGCGAAACAGTGCCGCTGAAAT
TACAAATCCGCAGTCGTTACGGTATTCGGCAACTGATTTGGCAGGGCGATACGCAGATATTAAGTTTGACGCCAGGCGCA
CAAGCCAACAGCGCGGAGGGCTGGACGCTGATCATGCCTGACTGGCAGAACGGGGAAGGGGCGAGCAATCACTGGCGATT
GTCGGTGGTGGTGGAAGATAACCAGGGGCAGCGTGTCTCCTCCAATGAGATCACGCTAACGCTTGTCGAACCGTTCGACG
CATTGTCAAACGACGAACTGCGCTGGGAACCGTAA

Upstream 100 bases:

>100_bases
GGATTTTCCTGAAAGCGCGAGAAAATACGACAAAAGTTGCCAGTAATCGTTATTCTTAAAGGCTATGGTTTTTCATTTTT
TACCGGAAGTTACCGACGTT

Downstream 100 bases:

>100_bases
TCAGAAAATGCGCTCCTGATGCACCCATACCGCTGCTTCCACGCGAGACTTGAGCTTCATTTTCTTCAGCATGTGCTTGA
CGTGCACTTTTACTGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MSRFVPRIISFYLLLLAAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGE
QAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDDGLVSNV
GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFY
QHLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSA
GEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGA
QANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP

Sequences:

>Translated_464_residues
MSRFVPRIISFYLLLLAAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGE
QAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDDGLVSNV
GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFY
QHLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSA
GEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGA
QANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP
>Mature_463_residues
SRFVPRIISFYLLLLAAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQ
AKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDDGLVSNVG
VGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQ
HLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAG
EVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQ
ANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intimin/invasin family [H]

Homologues:

Organism=Escherichia coli, GI145693120, Length=464, Percent_Identity=99.1379310344828, Blast_Score=944, Evalue=0.0,
Organism=Escherichia coli, GI145693153, Length=361, Percent_Identity=32.409972299169, Blast_Score=173, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52049; Mature: 51918

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFVPRIISFYLLLLAAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFA
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDN
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
EGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDDGLVSNVGVGQRWARGNWLVGYNTFYD
CCCEECCCCCEEEEECCCCCEEEHHHCCCCCCCCCCEECCCCCCEECCCCEEEEEHHHHH
NLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFY
HHHHHHHHHCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
QHLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQN
HHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
NLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATP
CCEEEEEEEECCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECC
PWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEG
CCCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCC
ASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP
CCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
SRFVPRIISFYLLLLAAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDN
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
EGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDDGLVSNVGVGQRWARGNWLVGYNTFYD
CCCEECCCCCEEEEECCCCCEEEHHHCCCCCCCCCCEECCCCCCEECCCCEEEEEHHHHH
NLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFY
HHHHHHHHHCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
QHLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQN
HHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
NLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATP
CCEEEEEEEECCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECC
PWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEG
CCCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCC
ASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP
CCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2657652; 2649492; 7567469 [H]