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The map label for this gene is ycgG [H]

Identifier: 157160668

GI number: 157160668

Start: 1265735

End: 1267300

Strand: Direct

Name: ycgG [H]

Synonym: EcHS_A1264

Alternate gene names: 157160668

Gene position: 1265735-1267300 (Clockwise)

Preceding gene: 157160667

Following gene: 157160669

Centisome position: 27.26

GC content: 44.57

Gene sequence:

>1566_bases
ATGGCATTTTCATGTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATG
CTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGAT
ATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAA
TGCAACCTCGAGGAGCAATATCAGCTTGGCACTGAAGCAGCTCTGAAACCTCACCTGCGCACAATCATCATTCTCAAACA
GGGAATAGTCTGGTGTACATCCCTGCCTGGGAATCGGGTCCTGTTGTCTCGTATTCCTGTTTTCCCGGACAGTAATTTAC
TGTTGGCTCCAGCAATCGACACCGTTAATAGATTACCTATCCTGCTCTATCAGAACCAATTTGCAGATACGCGCATTTTG
GTTACGATAAGCGATCAGCATATTCGTGGGGCACTTAATGTACCCTTGAAAGGGGTAAGGTATGTATTACGCGTGGCGGA
TGACATTATTGGACCAACGGGTGATGTGATGACGCTTAATGGACATTATCCCTATACCGAGAAGGTTCACTCCACAAAAT
ATCATTTCACTATTATCTTTAACCCGCCGCCACTCTTTAGCTTCTACAGACTTATCGATAAAGGCTTTGGGATTTTAATA
TTTATTCTGTTAATCGCCTGCGCCGCTGCCTTCCTGCTTGATAGATATTTCAATAAAAGCGCAACGCCTGAAGAGATCCT
GCGACGGGCAATAAATAATGGGGAGATCGTCCCTTTTTACCAACCTGTGGTAAATGGTCGGGAAGGGACATTGCGGGGAG
TTGAGGTGTTAGCCCGCTGGAAACAACCTCACGGTGGATATATATCACCCGCGGCATTTATTCCACTTGCTGAAAAATCC
GGATTAATCGTTCCGCTTACGCAAAGCCTGATGAATCAGGTTGCCAGACAGATGAACGCTATCGCGAGTAAATTGCCGGA
AGGTTTTCATATTGGAATTAATTTTAGCGCTTCGCATATTATTTCGCCGACGTTTGTCGACGAGTGTTTAAATTTCCGTG
ACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTT
CAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCACTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTA
TCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCC
GAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTCGATCAGTATCGTCGCTGAAGGTGTCGAAACGAAAGAACAA
CTTGACTATCTGAACCAAAATAATATCACATTTCAGCAGGGTTATTATTTCTATAAACCTGTTACATACATCGACCTGGT
CAAAATTATCCTTTCTAAACCGAAGGTGAAGGTTGTGGTTGAGTGA

Upstream 100 bases:

>100_bases
ATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAG
ATGCCAGCGCGAGCGAATGA

Downstream 100 bases:

>100_bases
AAATTGATCAGTAAGGCCATAGTGCGGTGTAATTATAGACAGCTAATTAGCTCGTTGCCTCTTGTTACTATTGTTCATTA
TTTTGTTTGCTATAATTGTT

Product: cyclic diguanylate phosphodiesterase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MAFSCIKPFGRDKQMRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKE
CNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRIL
VTISDQHIRGALNVPLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILI
FILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKS
GLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLV
QRLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQ
LDYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE

Sequences:

>Translated_521_residues
MAFSCIKPFGRDKQMRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKE
CNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRIL
VTISDQHIRGALNVPLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILI
FILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKS
GLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLV
QRLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQ
LDYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE
>Mature_520_residues
AFSCIKPFGRDKQMRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKEC
NLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILV
TISDQHIRGALNVPLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIF
ILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSG
LIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQ
RLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQL
DYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=507, Percent_Identity=99.8027613412229, Blast_Score=1033, Evalue=0.0,
Organism=Escherichia coli, GI1786507, Length=251, Percent_Identity=44.2231075697211, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1788502, Length=252, Percent_Identity=39.2857142857143, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI87081980, Length=528, Percent_Identity=28.4090909090909, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI87081743, Length=295, Percent_Identity=34.5762711864407, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI87081921, Length=238, Percent_Identity=34.8739495798319, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI1790496, Length=279, Percent_Identity=31.5412186379928, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787541, Length=235, Percent_Identity=34.0425531914894, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI226510982, Length=250, Percent_Identity=31.2, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787055, Length=239, Percent_Identity=29.2887029288703, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082096, Length=235, Percent_Identity=29.7872340425532, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1788849, Length=258, Percent_Identity=28.6821705426357, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 58468; Mature: 58336

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSCIKPFGRDKQMRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNIN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHH
HILEEASQATQTAVNIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCHHHEEEEEECCCEEEECCCCCEE
LLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNVPLKGVR
EEEECCCCCCCCEEEECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHH
YVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILI
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHH
FILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARW
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHH
KQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHI
CCCCCCCCCCHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHC
ISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGT
CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
GYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQ
CCHHHHHHHHCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHH
LDYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE
HHHCCCCCEEEECCEEEECCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
AFSCIKPFGRDKQMRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNIN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHH
HILEEASQATQTAVNIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCHHHEEEEEECCCEEEECCCCCEE
LLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNVPLKGVR
EEEECCCCCCCCEEEECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHH
YVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILI
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHH
FILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARW
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHH
KQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHI
CCCCCCCCCCHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHC
ISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGT
CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
GYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQ
CCHHHHHHHHCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHH
LDYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE
HHHCCCCCEEEECCEEEECCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]