Click here to switch to the map view.

The map label for this gene is flgA [H]

Identifier: 157160599

GI number: 157160599

Start: 1193883

End: 1194542

Strand: Reverse

Name: flgA [H]

Synonym: EcHS_A1195

Alternate gene names: 157160599

Gene position: 1194542-1193883 (Counterclockwise)

Preceding gene: 157160611

Following gene: 157160598

Centisome position: 25.72

GC content: 53.03

Gene sequence:

>660_bases
ATGCTGGCAATAAAACGTAGCGTGGCGATCATTGCGATACTGTTCAGTCCGTTAAGTGCGGCGAGCAATCTCACATCGCA
ATTGCAAACCTTTTTTAGCGCCCAGCTCGCGGGGGTAAGTGATGAGGTTCGTGTTTCTATTCGTACAGCGCCCAATCTAC
TACCGCCGTGCGAGCAGCCATTGCTTTCGATGAGCAATAATTCCCGCCTGTGGGGCAATGTGAATGTGTTGGCACGCTGC
GGTAACGACAAACGATATTTACAGGTTAATGTACAGGCCACAGGAAATTATGTGGTTGCCGCGATGCCCATTGCGCGGGG
AGGAAAGCTGGAAGCTGGCAATGTCAAACTGAAACGCGGACGGCTGGATACCCTGCCACCGCGTACGGTGCTGGATATCA
ATCAACTTGTTGATGCCATTAGCCTGCGCGATCTATCACCCGATCAACCTATCCAGTTAACCCAGTTTCGCCAGGCATGG
CGGGTAAAAGCGGGACAACGCGTCAACGTGATCGCCAGCGGTGATGGGTTTAGCGCCAACGCAGAAGGTCAGGCGCTGAA
CAATGCAGCCGTCGCACAGAATGCGCGGGTGCGCATGGTATCGGGACAGGTAGTCAGCGGCGTTGTTGATGCAGATGGGA
ATATTCTTATAAACCTGTAA

Upstream 100 bases:

>100_bases
GTTATCGGCGGAATAAACGCAAAATGGGTCGCTATTTATGCCGTTGATGACCATTGCGGACAGGTACAATTCACGTTGTA
GAAATGGCTGGGGGGCGAAA

Downstream 100 bases:

>100_bases
GCTGTTAAAGATTACCCGTCCCTTGCCGATAAATAAGCAACACATGATAAAAGCGCCCTCAATGAGGAATAAACCATGAG
TATTGATCGCACTTCGCCTC

Product: flagellar basal body P-ring biosynthesis protein FlgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLAIKRSVAIIAILFSPLSAASNLTSQLQTFFSAQLAGVSDEVRVSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARC
GNDKRYLQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAW
RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL

Sequences:

>Translated_219_residues
MLAIKRSVAIIAILFSPLSAASNLTSQLQTFFSAQLAGVSDEVRVSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARC
GNDKRYLQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAW
RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL
>Mature_219_residues
MLAIKRSVAIIAILFSPLSAASNLTSQLQTFFSAQLAGVSDEVRVSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARC
GNDKRYLQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAW
RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL

Specific function: Involved in the assembly process of the P-ring formation. It may associate with flgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly [H]

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgA family [H]

Homologues:

Organism=Escherichia coli, GI1787312, Length=219, Percent_Identity=98.1735159817352, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017585
- InterPro:   IPR013974 [H]

Pfam domain/function: PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 23425; Mature: 23425

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIKRSVAIIAILFSPLSAASNLTSQLQTFFSAQLAGVSDEVRVSIRTAPNLLPPCEQP
CEEEHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH
LLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRG
HHHCCCCCEEEECEEEEEEECCCCEEEEEEEEECCCEEEEEEEECCCCEEECCCEEEECC
RLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSAN
CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL
CCCCCCCCHHHCCCCEEEEECCCEEEEEEECCCCEEEEC
>Mature Secondary Structure
MLAIKRSVAIIAILFSPLSAASNLTSQLQTFFSAQLAGVSDEVRVSIRTAPNLLPPCEQP
CEEEHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH
LLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRG
HHHCCCCCEEEECEEEEEEECCCCEEEEEEEEECCCEEEEEEEECCCCEEECCCEEEECC
RLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSAN
CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL
CCCCCCCCHHHCCCCEEEEECCCEEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]