Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is csgG [H]
Identifier: 157160559
GI number: 157160559
Start: 1163747
End: 1164580
Strand: Reverse
Name: csgG [H]
Synonym: EcHS_A1155
Alternate gene names: 157160559
Gene position: 1164580-1163747 (Counterclockwise)
Preceding gene: 157160560
Following gene: 157160554
Centisome position: 25.08
GC content: 50.0
Gene sequence:
>834_bases ATGCAGCGCTTATTTCTTTTGGTTGCCGTCATGTTACTGAGCGGATGCTTAACCGCCCCGCCTAAAGAAGCCGCCAGACC GACATTAACGCCTCGTGCTCAGAGCTACAAAGATTTGACCCATCTGCCAGCGCCGACGGGTAAAATCTTTGTTTCGGTAT ACAACATTCAGGACGAAACCGGGCAATTTAAACCCTACCCGGCAAGTAACTTCTCCACTGCTGTTCCGCAAAGCGCCACG GCAATGCTGGTCACGGCACTTAAAGATTCTCGCTGGTTTATACCGCTGGAGCGCCAGGGCTTACAAAACCTGCTTAACGA GCGCAAGATTATTCGTGCGGCACAAGAAAACGGCACGGTTGCCATTAATAACCGAATCCCGCTGCAATCTTTAACGGCGG CAAATATCATGGTTGAAGGTTCGATTATCGGTTATGAAAGCAACGTCAAATCTGGCGGGGTTGGGGCAAGATATTTTGGC ATCGGTGCCGACACGCAATACCAGCTCGATCAGATTGCCGTGAACCTGCGCGTCGTCAATGTGAGTACCGGCGAGATCCT TTCTTCGGTGAACACCAGTAAGACGATACTTTCCTATGAAGTTCAGGCCGGGGTTTTCTGCTTTATTGACTACCAGCGCT TGCTTGAAGGGGAAGTGGGTTACACCTCGAACGAACCTGTTATGCTGTGCCTGATGTCGGCTATCGAAACAGGGGTCATT TTCCTGATTAATGATGGTATCGACCGTGGTCTGTGGGATTTGCAAAATAAAGCAGAACGGCAGAATGACATTCTGGTGAA ATACCGCCATATGTCGGTTCCACCGGAATCCTGA
Upstream 100 bases:
>100_bases TGACAGATCGTAAAACCGGACAAACCTCGACCATCCAGGTTTCGGGTTTACAAAATAACTCAACCGATTTTTAAGCCCCA GCTTCATAAGGAAAATAATC
Downstream 100 bases:
>100_bases CAGATAAAAAAGCCGGAATTATCATCCGGCATTTTACTGTTTAAGCGAAAGCGTGAGTGCCCCTCACGCTTTATTTTTGA TTTCCTGCTCACGGTGCGCC
Product: curli production assembly/transport subunit CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MQRLFLLVAVMLLSGCLTAPPKEAARPTLTPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFCFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES
Sequences:
>Translated_277_residues MQRLFLLVAVMLLSGCLTAPPKEAARPTLTPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFCFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES >Mature_277_residues MQRLFLLVAVMLLSGCLTAPPKEAARPTLTPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFCFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=277, Percent_Identity=99.2779783393502, Blast_Score=565, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 30474; Mature: 30474
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLFLLVAVMLLSGCLTAPPKEAARPTLTPRAQSYKDLTHLPAPTGKIFVSVYNIQDET CHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV CCCCCCCCCCCCCCCCCCHHHHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN EECCCCCHHHHCEEEEEEECEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEE VSTGEILSSVNTSKTILSYEVQAGVFCFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI ECHHHHHHHCCCCCEEEEEEECCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES EEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC >Mature Secondary Structure MQRLFLLVAVMLLSGCLTAPPKEAARPTLTPRAQSYKDLTHLPAPTGKIFVSVYNIQDET CHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV CCCCCCCCCCCCCCCCCCHHHHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN EECCCCCHHHHCEEEEEEECEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEE VSTGEILSSVNTSKTILSYEVQAGVFCFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI ECHHHHHHHCCCCCEEEEEEECCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES EEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA