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The map label for this gene is yccT [H]

Identifier: 157160485

GI number: 157160485

Start: 1088725

End: 1089387

Strand: Reverse

Name: yccT [H]

Synonym: EcHS_A1073

Alternate gene names: 157160485

Gene position: 1089387-1088725 (Counterclockwise)

Preceding gene: 157160487

Following gene: 157160484

Centisome position: 23.46

GC content: 50.38

Gene sequence:

>663_bases
ATGAAAACCGGCATCGTGACCACCTTGATTGCATTATGTTTGCCGGTATCCGTTTTTGCCACCACGCTGCGGCTTTCAAC
CGATGTCGATCTTCTGGTACTCGACGGCAAGAAGGTTTCCAGCTCTCTGCTGCGCGGTGCGGACAGCATTGAACTGGATA
ATGGACCGCATCAGTTAGTGTTTCGCGTTGAGAAGACGATTCATCTTTCCAATAGTGAAGAACGGCTGTATATCTCCCCA
CCGCTGGTGGTCAGTTTTAATACCCAGCTCATCAACCAGGTCAATTTTCGCCTGCCTCGCCTGGAGAATGAGCGGGAAGC
TAACCATTTTGATGCCGCGCCGCACCTTGAATTGTTGGATGGCGATGCGACGCCAATTCCGGTAAAGCTGGATATTCTCG
CCATTACCTCAACGGCAAAAACGATTGATTATGAGGTCGAGGTTGAACGCTATAACAAATCCGCGAAACGCGCTTCACTA
CCGCAATTTGCCACGATGATGGCAGATGACAGTACGCTGCTTTCGGGTGTTTCCGAGCTGGATGCTATTCCACCGCAGTC
TCAGGTGCTCACAGAACAACGGCTGAAGTATTGGTTTAAACTGGCTGACCCACAAACGCGAAATACTTTCCTGCAGTGGG
CGGAAAAACAACCATCTTCCTGA

Upstream 100 bases:

>100_bases
TGAGAGCAAAAGCGGGAAATATGTCTATATGTTAGTAAGTATGATTAAAGAAAAATTTTGACACATTATTATTCGGGCGG
TCTTTTGACAGGAGCTACCT

Downstream 100 bases:

>100_bases
GATTTTTGTGCCTGTGCGCAGGCTTTTTCGGTCTTTATCTTGCAGCGATAAGTGCTTACAGTAATCTGTAGGAAAGTTAA
CTACGGATGTACATTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISP
PLVVSFNTQLINQVNFRLPRLENEREANHFDAAPHLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS

Sequences:

>Translated_220_residues
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISP
PLVVSFNTQLINQVNFRLPRLENEREANHFDAAPHLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS
>Mature_220_residues
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISP
PLVVSFNTQLINQVNFRLPRLENEREANHFDAAPHLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

Organism=Escherichia coli, GI1787198, Length=220, Percent_Identity=99.5454545454545, Blast_Score=446, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 24575; Mature: 24575

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEECCCCCEEE
FRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPHLELLD
EEEEEEEEECCCCCEEEECCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEC
GDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL
CCCCCCEEEEEEEEEECCCEEEEEEEEEHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHH
DAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS
HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEECCCCCEEE
FRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPHLELLD
EEEEEEEEECCCCCEEEECCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEC
GDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL
CCCCCCEEEEEEEEEECCCEEEEEEEEEHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHH
DAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS
HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA