Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is artJ [H]
Identifier: 157160383
GI number: 157160383
Start: 960144
End: 960875
Strand: Reverse
Name: artJ [H]
Synonym: EcHS_A0964
Alternate gene names: 157160383
Gene position: 960875-960144 (Counterclockwise)
Preceding gene: 157160384
Following gene: 157160371
Centisome position: 20.69
GC content: 45.77
Gene sequence:
>732_bases ATGAAAAAGTTAGTTCTTGCCGCTTTACTTGCTTCCTTTACTTTCGGTGCTTCTGCCGCAGAGAAAATCAATTTTGGCGT TTCAGCCACCTATCCCCCCTTTGAATCTATAGGTGCTAATAATGAGATTGTCGGCTTTGATATCGATCTGGCAAAAGCCT TGTGCAAACAAATGCAGGCAGAATGTACTTTTACTAATCACGCGTTCGACAGCCTGATCCCGTCACTGAAATTCAGAAAA TATGACGCCGTAATCTCCGGTATGGATATCACGCCCGAGCGTAGCAAGCAGGTATCGTTTACCACGCCCTACTATGAAAA CTCAGCCGTCGTGATTGCCAAAAAAGATACCTACAAAACGTTTGCCGATCTGAAAGGCAAACGTATTGGGATGGAAAACG GCACCACGCACCAGAAATATATTCAGGATCAGCACCCCGAAGTGAAAACTGTCTCCTATGACAGTTATCAGAATGCCTTT ATCGATCTGAAAAATGGTCGTATTGATGGGGTATTTGGTGACACAGCGGTGGTAAACGAATGGCTGAAAACCAATCCGCA ACTGGGCGTTGCTACTGAAAAAGTGACCGATCCGCAATACTTCGGCACCGGTCTGGGCATCGCTGTACGTCCGGATAACA AAGCTCTGCTGGAAAAACTGAATAACGCGCTGGCAGCAATTAAAGCTGACGGTACATATCAGAAAATCAATGACCAGTGG TTCCCGCAGTAA
Upstream 100 bases:
>100_bases TTTAATCATATTTATTGCATATAAATTCACTTGATGGCATTGTTATCCCATGCCGCAGACACGGCCAAAAATCATAAGAT TGACAGACGGGAGTTCCATC
Downstream 100 bases:
>100_bases GATTCAGAAAGCCGCAACCGCGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA TGGCCCATGCAATGTATTGA
Product: arginine ABC transporter, periplasmic arginine-binding protein ArtJ
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK YDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW FPQ
Sequences:
>Translated_243_residues MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK YDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW FPQ >Mature_243_residues MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK YDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW FPQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=243, Percent_Identity=99.5884773662551, Blast_Score=503, Evalue=1e-144, Organism=Escherichia coli, GI1787088, Length=241, Percent_Identity=64.7302904564315, Blast_Score=343, Evalue=7e-96, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=40.174672489083, Blast_Score=168, Evalue=3e-43, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=35.9683794466403, Blast_Score=160, Evalue=7e-41, Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=32.7272727272727, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=29.5081967213115, Blast_Score=108, Evalue=2e-25,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26857; Mature: 26857
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEECHHHHHHHHHHHHH ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKT CCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHH FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCCEECCCCC FPQ CCC >Mature Secondary Structure MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEECHHHHHHHHHHHHH ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKT CCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHH FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCCEECCCCC FPQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]