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The map label for this gene is ybjN [H]

Identifier: 157160375

GI number: 157160375

Start: 953209

End: 953733

Strand: Direct

Name: ybjN [H]

Synonym: EcHS_A0956

Alternate gene names: 157160375

Gene position: 953209-953733 (Clockwise)

Preceding gene: 157160374

Following gene: 157160376

Centisome position: 20.53

GC content: 47.81

Gene sequence:

>525_bases
TTGCGTAAGCTGTGCCGGTCTTTTTATCGAAAGAGGTTGTACAAAATTATGACATCGCTGGTCGTTCCTGGTCTGGATAC
GCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTGAATGTGATAACTGTCAGGCTCTGCATCTGCCCCATATGC
AGAATTTCGACGGTGTCTTTGATGCCAAAATCGATCTGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGA
CCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATAT
GCAGGATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCAT
GGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGAC
GATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGA

Upstream 100 bases:

>100_bases
AATGATCCGCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAGTCGCAATCACATTACTGAT
CATGGTTTTGCCTGCGCTTT

Downstream 100 bases:

>100_bases
TAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTAAA
GATTATTTCACTTCTCTTGT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRKLCRSFYRKRLYKIMTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVR
PSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTD
DEGQNNVTENYFLH

Sequences:

>Translated_174_residues
MRKLCRSFYRKRLYKIMTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVR
PSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTD
DEGQNNVTENYFLH
>Mature_174_residues
MRKLCRSFYRKRLYKIMTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVR
PSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTD
DEGQNNVTENYFLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787077, Length=158, Percent_Identity=100, Blast_Score=326, Evalue=5e-91,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019660 [H]

Pfam domain/function: PF10722 YbjN [H]

EC number: NA

Molecular weight: Translated: 19810; Mature: 19810

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLCRSFYRKRLYKIMTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHEECCCCCEECCCCCCCCCCCH
DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQS
HCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH
LSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
HHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKLCRSFYRKRLYKIMTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHEECCCCCEECCCCCCCCCCCH
DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQS
HCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH
LSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
HHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]