Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157160361
Identifier: 157160361
GI number: 157160361
Start: 941052
End: 942224
Strand: Direct
Name: 157160361
Synonym: EcHS_A0942
Alternate gene names: NA
Gene position: 941052-942224 (Clockwise)
Preceding gene: 157160360
Following gene: 157160362
Centisome position: 20.27
GC content: 56.78
Gene sequence:
>1173_bases ATGGCTCAGGATTACCACCACGGAGTGCGCGTTGTTGAAGTCAACGAAGGCACTCGATCCATTACTACGGTGAGCACCGC CATCGTGGGCATGGTCTGCACGGGCGATGATGCCGATGCAAAAATGTTCCCTCTTAATAAACCCGTGCTGATCACTGATG TGCTTACTGCCAGCGGTAAAGCGGGTGAGTCAGGTACGCTGGCCCGTTCGCTGGATGCCATCGCTGACCAGGCAAAACCC GTGACCGTTGTTGTGCGTGTGCCGCAGGGTGAAACGGAAGAAGAAACCACGACCAATATCATCGGAGCAGTGACCGCTGA AGGTAAAAAAACAGGCATGAAAGCCCTGTTATCTGCCCAGTCACAGCTCGGCGTTAAACCGCGCATTCTCGGCGTGCCAG GCCACGACACCAAGGCGGTAGCTACTGAGTTGCTGAGCGTGGCGCAAAGCCTGCGTGGATTTGCTTACCTGTCAGCGTAT GGCTGCAAGACGGTACAGGAGGCGATCACTTACCGTGAAAACTTCAGCCAGCGCGAAGGGATGCTGATCTGGCCTGACTT TACTGGCTGGGACACGGTGCTGAATGCCGAAGCAACGGCATATGCCACCGCCCGTGCGCTTGGTCTGCGCGCCAAAATTG ACGAGCAGACCGGATGGCACAAAAGCCTGTCCAACGTGGGCGTGAACGGTGTCACCGGAATTTCTGCTGATGTGTTCTGG GATCTGCAGGACCCGGCAACCGATGCAGGTCTGCTGAACCAGAACGACGTCACCACGCTTGTGCGTAAAGACGGTTTCCG CTTCTGGGGTTCCCGCTGCCTGAGTGATGACCCGCTCTTTGCCTTCGAAAACTACACCCGCACGGCGCAGGTGCTGATGG ACACGATGGCAGAAGCACACATGTGGGCGGTGGATAAACCGCTTAACCCGTCGCTGGCCCGCGACATTATCGAGGGGATC CGCGCCAAAATGCGCAGCCTGGTCAGTCAGGGCTATCTCATTGGTGGTGATTGCTGGCTGGATGAGTCGGTGAACGACAA AGACACGCTGAAAGCCGGAAAACTCACCATCGACTACGACTACACGCCAGTGCCGCCACTTGAAAACCTGATGCTGCGTC AGCGCATCACCGATCAGTACCTGGTGAATTTCTCTAGCCAGGTCAGCGCGTAA
Upstream 100 bases:
>100_bases TCATTTTGTGTGAATAACGGTACAACTGCGCTTAGCTGCTTGTCAGACACAATCACTTCAACATAGGGCGAAGCCTAATC CAATCAGGAGGTTCGCCACT
Downstream 100 bases:
>100_bases GGGGACAACATGGCTTTACCACGCAAATTAAAACACCTGAACCTGTTTAATGACGGGAACAACTGGCAGGGGATCGTTGA GTCGCTGACGCTGCCGAAAT
Product: major tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Phage-Related Tail Protein; Phage TAIL SHEATH PROTEIN; Phage Tail Sheath-Like Protein; Prophage; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Tail Sheath Protein Bacteriophage; Bacteriophage Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFPLNKPVLITDVLTASGKAGESGTLARSLDAIADQAKP VTVVVRVPQGETEEETTTNIIGAVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFW DLQDPATDAGLLNQNDVTTLVRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGI RAKMRSLVSQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA
Sequences:
>Translated_390_residues MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFPLNKPVLITDVLTASGKAGESGTLARSLDAIADQAKP VTVVVRVPQGETEEETTTNIIGAVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFW DLQDPATDAGLLNQNDVTTLVRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGI RAKMRSLVSQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA >Mature_389_residues AQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFPLNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPV TVVVRVPQGETEEETTTNIIGAVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAYG CKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFWD LQDPATDAGLLNQNDVTTLVRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGIR AKMRSLVSQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42358; Mature: 42227
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFPLNKPVLITDVLTASGK CCCCCCCCEEEEEECCCCCHHHHHHHHHEEEEEECCCCCCEEECCCCCEEEEEEHHCCCC AGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIGAVTAEGKKTGMKALLSAQ CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHH SQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAYGCKTVQEAITYRENFSQREG HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCC MLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFW EEEECCCCCHHHEECCCHHHHHHHHHHHCEEECCCCCCHHHHHHHCCCCCCCCCCCEEEE DLQDPATDAGLLNQNDVTTLVRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLMDTMAEAH ECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHH MWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLIGGDCWLDESVNDKDTLKAGKLTIDYD HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECEEEECCCCCCHHHHEECCEEEECC YTPVPPLENLMLRQRITDQYLVNFSSQVSA CCCCCCHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure AQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFPLNKPVLITDVLTASGK CCCCCCCEEEEEECCCCCHHHHHHHHHEEEEEECCCCCCEEECCCCCEEEEEEHHCCCC AGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIGAVTAEGKKTGMKALLSAQ CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHH SQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAYGCKTVQEAITYRENFSQREG HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCC MLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFW EEEECCCCCHHHEECCCHHHHHHHHHHHCEEECCCCCCHHHHHHHCCCCCCCCCCCEEEE DLQDPATDAGLLNQNDVTTLVRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLMDTMAEAH ECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHH MWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLIGGDCWLDESVNDKDTLKAGKLTIDYD HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECEEEECCCCCCHHHHEECCEEEECC YTPVPPLENLMLRQRITDQYLVNFSSQVSA CCCCCCHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA