Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157160340
Identifier: 157160340
GI number: 157160340
Start: 925111
End: 925842
Strand: Direct
Name: 157160340
Synonym: EcHS_A0921
Alternate gene names: NA
Gene position: 925111-925842 (Clockwise)
Preceding gene: 157160339
Following gene: 157160341
Centisome position: 19.92
GC content: 40.03
Gene sequence:
>732_bases ATGTCAATCGGATATCGCCTTGTTTTTTGTCAAGAAAAGAATAATAGGCTAAAAATGAAAATTAATAATGTAGCGTTACC AATATCTCTTGCTGTAATCCTAACTGGTTGCGTGCCACATGCTTCTAACCGAAATATCACTGCTATTGAAGTGGTGAAGC CTGCTATTGGGCAAAGTGCTACCGCCTACATGGGCGATCCCATTATCACATCTGCTACTGGATTTAAAACGGACGTACTA GAACTTGGTGCGGCTAATGGTGCATTGTCTTCTATCGCTGCTGGTACATATTGCAGTGAGGGGAATGGAATTTACCGCAA TTATCATAACCCTCAAGCTGTTGCGTTAAAAAATCTCTATGGGCAAATCGGTAACTATGTTGATTATGTTAGTTACGATG CTGCAAAAAATGAGATATCACCGCCAAATGGTACTTCTTATACTGCATCAGAAATTTCTATCAAACGTGTTCCTGATGGG CTGTGTCGAGTTAGTAACTCATTGGTTAAGACTATCGAATACAATGGAAATGCAGGCGGTGTAATGAAGTTCACCTATCG TGAATTTGCAAACGATATGGCTCGTGCAGCATTTACAACAGATTTTTCTGTAGATTCTAAGGGAAGTGACGTTATCGCTT ACAAAGGTGCCAAGTTCAAAGTGAACAAGGCTGATAACTCGTCTATTTCTTATACAATTATTTCTGGCTTTGACAAGGCT GTCACGTTCTAG
Upstream 100 bases:
>100_bases TTATGCAGAAGGTGTGGGAAGACGACAGCTGGCTGCATTGATTTTGTCAATAGACGCTTGTTTTTACTAATCAAAAAGGG TTACATATGAGTGAGAGGCG
Downstream 100 bases:
>100_bases TTTTCACGCTTACTGAGTATGTTACGATTTTGCACATTCTGCATAAGCGCGCATGTCTATGCTGCATGAGATCGCATGAT CGTTTGAGGATCTTTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSIGYRLVFCQEKNNRLKMKINNVALPISLAVILTGCVPHASNRNITAIEVVKPAIGQSATAYMGDPIITSATGFKTDVL ELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLYGQIGNYVDYVSYDAAKNEISPPNGTSYTASEISIKRVPDG LCRVSNSLVKTIEYNGNAGGVMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA VTF
Sequences:
>Translated_243_residues MSIGYRLVFCQEKNNRLKMKINNVALPISLAVILTGCVPHASNRNITAIEVVKPAIGQSATAYMGDPIITSATGFKTDVL ELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLYGQIGNYVDYVSYDAAKNEISPPNGTSYTASEISIKRVPDG LCRVSNSLVKTIEYNGNAGGVMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA VTF >Mature_242_residues SIGYRLVFCQEKNNRLKMKINNVALPISLAVILTGCVPHASNRNITAIEVVKPAIGQSATAYMGDPIITSATGFKTDVLE LGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLYGQIGNYVDYVSYDAAKNEISPPNGTSYTASEISIKRVPDGL CRVSNSLVKTIEYNGNAGGVMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKAV TF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26039; Mature: 25908
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGYRLVFCQEKNNRLKMKINNVALPISLAVILTGCVPHASNRNITAIEVVKPAIGQSA CCCCEEEEEEECCCCEEEEEECCEEEHHHHEEHHHHCCCCCCCCCEEEEEEECCCCCCCC TAYMGDPIITSATGFKTDVLELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLY EEECCCCEEECCCCCCHHHHHHCCCCCHHHHHHCCCEECCCCCEEECCCCCHHHHHHHHH GQIGNYVDYVSYDAAKNEISPPNGTSYTASEISIKRVPDGLCRVSNSLVKTIEYNGNAGG HHHCCHHHHHCCCCCCCCCCCCCCCCEECCEEEEECCCCHHHHHHHHHEEEEEECCCCCC VMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA EEEEHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCHH VTF CCC >Mature Secondary Structure SIGYRLVFCQEKNNRLKMKINNVALPISLAVILTGCVPHASNRNITAIEVVKPAIGQSA CCCEEEEEEECCCCEEEEEECCEEEHHHHEEHHHHCCCCCCCCCEEEEEEECCCCCCCC TAYMGDPIITSATGFKTDVLELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLY EEECCCCEEECCCCCCHHHHHHCCCCCHHHHHHCCCEECCCCCEEECCCCCHHHHHHHHH GQIGNYVDYVSYDAAKNEISPPNGTSYTASEISIKRVPDGLCRVSNSLVKTIEYNGNAGG HHHCCHHHHHCCCCCCCCCCCCCCCCEECCEEEEECCCCHHHHHHHHHEEEEEECCCCCC VMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKA EEEEHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCHH VTF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA