Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is 157160332
Identifier: 157160332
GI number: 157160332
Start: 919649
End: 920158
Strand: Direct
Name: 157160332
Synonym: EcHS_A0913
Alternate gene names: NA
Gene position: 919649-920158 (Clockwise)
Preceding gene: 157160331
Following gene: 157160333
Centisome position: 19.8
GC content: 50.2
Gene sequence:
>510_bases ATGTTTGATTACCAAGTTTCCAAACATCCACATTTTGATGAAGCCTGTCGTGCATTCGCATTGCGCCACAACCTGGTGCA ACTGGCAGAACGTGCTGGCATGAATGTGCAGATTCTGCGGAACAAGCTGAACCCAGCTCAACCTCATTTATTAACCGCAC CAGAAATCTGGCTGCTTACCGATCTGACTGAAGATTCAACGCTGGTAGATGGTTTTCTGGCACAGATTCATTGTCTGCCA TGTGTACCGATTAATGAGGTGGCAAAAGAGAAACTGCCACATTACGTCATGAGTGCAACCGCAGAGATCGGGCGTGTTGC TGCAGGTGCGGTATCTGGCGATGTAAAAACCTGTGCCGGTCGTCGTGATGCTATCAGCAGCATTAACTCTGTAACACGAC TGATGGCGCTGGCGGCTGTTTCATTGCAGGCCCGTTTACAGGCTAATCCTGCGATGGCGAGTGCAGTTGATACCGTGACT GGCCTCGGTGCTTCATTCGGTTTGCTGTGA
Upstream 100 bases:
>100_bases AAGTGATGATCAACATAGCAGCAATGACCGTTGATGCGCTTTCAGAATGCAATCTAAACCTTAATTAGTTCGATTCTGAG ATACATCAGAGGCATTGACC
Downstream 100 bases:
>100_bases GGTGCTTATGCTGACGAAAGAACCATCATTTGCATCGCTGCTGGTAAAACAAAGCCCGGCAATGCACTACGGTCACGGCT GGATCATGGGTGAGGATGGT
Product: phage regulatory protein CII (CP76)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLTDLTEDSTLVDGFLAQIHCLP CVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTCAGRRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVT GLGASFGLL
Sequences:
>Translated_169_residues MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLTDLTEDSTLVDGFLAQIHCLP CVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTCAGRRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVT GLGASFGLL >Mature_169_residues MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLTDLTEDSTLVDGFLAQIHCLP CVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTCAGRRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVT GLGASFGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009679 [H]
Pfam domain/function: PF06892 Phage_CP76 [H]
EC number: NA
Molecular weight: Translated: 18129; Mature: 18129
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEECCCCEEEEE DLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTCAG ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCC RRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVTGLGASFGLL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEECCCCEEEEE DLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTCAG ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCC RRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVTGLGASFGLL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1701261 [H]