Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is ybjI [H]
Identifier: 157160325
GI number: 157160325
Start: 914152
End: 914967
Strand: Reverse
Name: ybjI [H]
Synonym: EcHS_A0906
Alternate gene names: 157160325
Gene position: 914967-914152 (Counterclockwise)
Preceding gene: 157160326
Following gene: 157160324
Centisome position: 19.7
GC content: 46.08
Gene sequence:
>816_bases ATGAGCATTAAATTAATTGCGGTAGACATGGATGGTACTTTCTTAAGCGATCAAAAAACCTATGACCGTGAGCGGTTTAT GGCTCAGTATCAGCAAATGAAAGCACAAGGCATTCGCTTTGTGGTCGCCAGCGGGAATCAATATTATCAGTTGATCTCTT TCTTCCCTGAAATTGCTAATGAAATTGCCTTTGTGGCTGAAAACGGCGGCTGGGTAGTGAGTGAAGGCAAAGATGTTTTT AATGGCGAGCTGTCGAAGGATGCCTTTACTACTGTCGTGGAACATTTGCTGACGCGCCCGGAAGTGGAAATTATTGCCTG CGGAAAAAATAGCGCCTATACGCTCAAAAAATATGACGATGCCATGAAAACGGTGGCGGAAATGTATTATCACCGTCTGG AATACGTCGATAACTTTGACAACTTAGAAGATATTTTCTTTAAGTTTGGCCTGAATCTTTCCGATGAACTGATTCCACAA GTACAAAAAGCATTACATGAGGCCATCGGCGATATTATGGTGCCAGTCCACACCGGCAACGGCAGCATCGATCTGATTAT CCCCGGCGTACATAAAGCCAATGGCCTTCGCCAACTGCAGAAATTATGGGGAATAGACGACAGCGAAGTGGTGGTCTTTG GCGATGGCGGTAACGATATTGAGATGCTGCGTCAGGCAGGCTTTAGTTTTGCAATGGAAAATGCCGGCAGCGCGGTCGTC GCAGCGGCAAAATACCGGGCAGGCTCCAATAACCGTGAAGGCGTACTGGATGTGATCGATAAAGTGCTTAAACACGAAGC GCCATTTGACCAATAA
Upstream 100 bases:
>100_bases CAATGCTGGTTGTACTGGCGCTGGTTATTCTCGCGGCTATTGTCGCGAAAGCCGTCGCCAAACCCGATACCAAAACGCAG ACGGCGATGGAGAATAGTTG
Downstream 100 bases:
>100_bases AAACGGCAGCACGCCCGGCAACACAATACCTGAATGAAGGCTGCATAATTCGCGGAAATTAACCCGCTGCATTATTTCAG GCGAAATGATTATGAAAAAT
Product: phosphatase YbjI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSIKLIAVDMDGTFLSDQKTYDRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVF NGELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVV AAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ
Sequences:
>Translated_271_residues MSIKLIAVDMDGTFLSDQKTYDRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVF NGELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVV AAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ >Mature_270_residues SIKLIAVDMDGTFLSDQKTYDRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFN GELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQV QKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVVA AAKYRAGSNNREGVLDVIDKVLKHEAPFDQ
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates FMN and beta-glucose 1-phosphate [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI87081790, Length=271, Percent_Identity=98.8929889298893, Blast_Score=552, Evalue=1e-158, Organism=Escherichia coli, GI1787043, Length=270, Percent_Identity=51.4814814814815, Blast_Score=285, Evalue=2e-78, Organism=Escherichia coli, GI2367265, Length=271, Percent_Identity=26.1992619926199, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 30238; Mature: 30106
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKLIAVDMDGTFLSDQKTYDRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIAN CCEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHH EIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDD HEEEEECCCCEEEECCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHH AMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVPVHTGN HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC GSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVV CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCHHHHHCCCCEEE AAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ EEHHHCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SIKLIAVDMDGTFLSDQKTYDRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIAN CEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHH EIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDD HEEEEECCCCEEEECCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHH AMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVPVHTGN HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC GSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVV CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCHHHHHCCCCEEE AAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ EEHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123 [H]