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The map label for this gene is ybiB

Identifier: 157160276

GI number: 157160276

Start: 861852

End: 862814

Strand: Direct

Name: ybiB

Synonym: EcHS_A0855

Alternate gene names: 157160276

Gene position: 861852-862814 (Clockwise)

Preceding gene: 157160275

Following gene: 157160277

Centisome position: 18.56

GC content: 55.66

Gene sequence:

>963_bases
ATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGG
TCTGTATGCTCATATGCTCAATGGTGAAGTCCCTGACCTTGAGTTGGGCGGCGTATTGATTGCGCTGCGTATCAAAGGAG
AAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCG
ATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAA
ACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGG
GTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCG
TTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACT
GGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGT
TCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCG
CAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACA
AGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAA
TCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTT
TAA

Upstream 100 bases:

>100_bases
GCAACCGGAAGTCCCTGAAGGTATAGTTAAAAAGAAAGAAAAAACGAAATCCCCACGCCGTCGGCGGCGTTAATGATGTG
AGTCAGGTAAGGAGTCGTAA

Downstream 100 bases:

>100_bases
TTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTT
CCCACGCCCGGCGTGCAGCA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKP
MPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
QINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF

Sequences:

>Translated_320_residues
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKP
MPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
QINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF
>Mature_320_residues
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKP
MPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
QINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family

Homologues:

Organism=Escherichia coli, GI1787019, Length=320, Percent_Identity=100, Blast_Score=660, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBIB_ECOLI (P30177)

Other databases:

- EMBL:   L02123
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   H64816
- RefSeq:   AP_001431.1
- RefSeq:   NP_415321.1
- ProteinModelPortal:   P30177
- SMR:   P30177
- DIP:   DIP-11425N
- STRING:   P30177
- EnsemblBacteria:   EBESCT00000001383
- EnsemblBacteria:   EBESCT00000014655
- GeneID:   945424
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0785
- KEGG:   eco:b0800
- EchoBASE:   EB1540
- EcoGene:   EG11580
- eggNOG:   COG0547
- GeneTree:   EBGT00050000010396
- HOGENOM:   HBG367858
- OMA:   PEVTARW
- ProtClustDB:   PRK08136
- BioCyc:   EcoCyc:EG11580-MONOMER
- Genevestigator:   P30177
- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072
- Gene3D:   G3DSA:1.20.970.10
- Gene3D:   G3DSA:3.40.1030.10

Pfam domain/function: PF02885 Glycos_trans_3N; SSF47648 Glyco_trans_3; SSF52418 Glyco_trans_3

EC number: NA

Molecular weight: Translated: 35049; Mature: 35049

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEML
CCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCHHHH
GFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED
HHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS
HHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCH
AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC
QINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCL
CCEEECCCCCEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEEE
VATGEAATISDGLARVNQAF
EECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEML
CCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCHHHH
GFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED
HHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS
HHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCH
AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC
QINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCL
CCEEECCCCCEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEEE
VATGEAATISDGLARVNQAF
EECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503