Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is zitB
Identifier: 157160227
GI number: 157160227
Start: 810483
End: 811424
Strand: Reverse
Name: zitB
Synonym: EcHS_A0806
Alternate gene names: 157160227
Gene position: 811424-810483 (Counterclockwise)
Preceding gene: 157160228
Following gene: 157160214
Centisome position: 17.47
GC content: 53.08
Gene sequence:
>942_bases ATGGCGCACTCACACTCACACACGTCCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATGCTTTCGGCGT GACTGCCGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGCCGATGCGGGTCATA TGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCAATTTTCACGTCGTCCTCCCACCATTCGCCACACT TTCGGTTGGCTAAGACTGACCACGCTCGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTG GGAGGCGATAGAACGCTTCCGCACGCCGCGTCCGGTCGAGGGCGGCATGATGATGGCAATTGCCGTGGCTGGGTTGCTGG CAAATATACTTTCTTTCTGGTTACTTCATCACGGCAGCGAAGAGAAAAACCTCAACGTACGAGCAGCGGCACTGCATGTG CTCGGGGACCTGCTGGGTTCGGTTGGGGCTATTATTGCCGCGTTGATTATTATCTGGACTGGCTGGACACCTGCTGACCC CATTCTCTCGATACTGGTGTCGCTTCTGGTTCTGCGTAGCGCGTGGCGACTGTTGAAAGATAGCGTGAATGAATTACTTG AAGGTGCACCGGTATCGCTGGATATCGCTGAACTGAAGCGTCGTATGTGCCGGGAAATCCCGGAAGTCCGCAATGTGCAC CATGTACATGTATGGATGGTAGGCGAGAAGCCGGTGATGACGTTGCATGTGCAGGTGATCCCGCCACACGATCACGATGC CTTGTTGGATCAGATCCAACACTACCTGATGGATCACTATCAGATTGAGCACGCCACCATTCAGATGGAATATCAACCTT GTCATGGGCCAGACTGCCACCTGAATGAAGGGGTGTCTGGCCATTCACATCATCACCATTAA
Upstream 100 bases:
>100_bases CCAATAATGGGAGAGCGGAGTCTCTCCCTTTTAATTTTTCACTTCTAAAAGCAGTATGATGTCATAAAGTTAAGTGAGAA TAATTAAGGGATGACTCGTC
Downstream 100 bases:
>100_bases TGGGACAGCGCGCGTGAGCCTCTTTCACGTGCGCTGTTGATCCACATCCGGCTGCCGTTGAGCGCAATAAAGGTCAGGAT GATGTACTCCAGAGACATGG
Product: zinc transporter ZitB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHT FGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV LGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVH HVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH
Sequences:
>Translated_313_residues MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHT FGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV LGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVH HVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH >Mature_312_residues AHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTF GWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVL GDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVHH VHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH
Specific function: Involved in zinc efflux across the cytoplasmic membrane, thus reducing zinc accumulation in the cytoplasm and rendering bacteria more resistant to zinc. It may contribute to zinc homeostasis at low concentrations of zinc, whereas zntA is required for grow
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily
Homologues:
Organism=Homo sapiens, GI52352805, Length=320, Percent_Identity=32.5, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI289803013, Length=320, Percent_Identity=32.8125, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI289803009, Length=320, Percent_Identity=32.8125, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI289803007, Length=320, Percent_Identity=32.8125, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI289803003, Length=320, Percent_Identity=32.8125, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI64762489, Length=320, Percent_Identity=32.8125, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI21361112, Length=309, Percent_Identity=33.9805825242718, Blast_Score=144, Evalue=9e-35, Organism=Homo sapiens, GI21359890, Length=289, Percent_Identity=31.8339100346021, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI20070323, Length=348, Percent_Identity=25.2873563218391, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI14210520, Length=231, Percent_Identity=29.004329004329, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI52352803, Length=132, Percent_Identity=43.9393939393939, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI52351208, Length=162, Percent_Identity=29.6296296296296, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI222080086, Length=129, Percent_Identity=27.1317829457364, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI40255009, Length=129, Percent_Identity=27.1317829457364, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1786966, Length=313, Percent_Identity=100, Blast_Score=630, Evalue=0.0, Organism=Escherichia coli, GI1790349, Length=276, Percent_Identity=23.9130434782609, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193210990, Length=321, Percent_Identity=33.0218068535826, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17555794, Length=312, Percent_Identity=33.0128205128205, Blast_Score=154, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17555796, Length=310, Percent_Identity=32.5806451612903, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI32564488, Length=303, Percent_Identity=31.023102310231, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17550440, Length=129, Percent_Identity=31.7829457364341, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17550442, Length=129, Percent_Identity=31.7829457364341, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320411, Length=179, Percent_Identity=35.7541899441341, Blast_Score=92, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6323899, Length=132, Percent_Identity=36.3636363636364, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324892, Length=120, Percent_Identity=37.5, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI24656728, Length=346, Percent_Identity=29.1907514450867, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24656724, Length=346, Percent_Identity=29.1907514450867, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24656720, Length=346, Percent_Identity=29.1907514450867, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24656715, Length=346, Percent_Identity=29.1907514450867, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI21357035, Length=346, Percent_Identity=29.1907514450867, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24583858, Length=321, Percent_Identity=28.9719626168224, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI24585900, Length=125, Percent_Identity=32.8, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24585898, Length=125, Percent_Identity=32.8, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24585896, Length=125, Percent_Identity=32.8, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI19921672, Length=125, Percent_Identity=32.8, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24584409, Length=157, Percent_Identity=30.5732484076433, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI28574430, Length=157, Percent_Identity=30.5732484076433, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24645863, Length=127, Percent_Identity=30.7086614173228, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24667550, Length=290, Percent_Identity=23.7931034482759, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24667546, Length=290, Percent_Identity=23.7931034482759, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ZITB_ECOLI (P75757)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - PIR: H64810 - RefSeq: AP_001383.1 - RefSeq: NP_415273.1 - ProteinModelPortal: P75757 - STRING: P75757 - EnsemblBacteria: EBESCT00000002800 - EnsemblBacteria: EBESCT00000014928 - GeneID: 945348 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW0735 - KEGG: eco:b0752 - EchoBASE: EB3426 - EcoGene: EG13662 - eggNOG: COG1230 - GeneTree: EBGT00050000009531 - HOGENOM: HBG317426 - OMA: SVWIVVE - ProtClustDB: PRK03557 - BioCyc: EcoCyc:B0752-MONOMER - Genevestigator: P75757 - HAMAP: MF_00552 - InterPro: IPR002524 - PANTHER: PTHR11562 - TIGRFAMs: TIGR01297
Pfam domain/function: PF01545 Cation_efflux
EC number: NA
Molecular weight: Translated: 34679; Mature: 34548
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS00511 CRF
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12fdf888)-; HASH(0x12ae0fb4)-; HASH(0x13437f14)-; HASH(0x12632620)-; HASH(0x12e8d10c)-; HASH(0x133c46bc)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAA CCCCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH LLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCE HVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCH EEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCC LNEGVSGHSHHHH CCCCCCCCCCCCH >Mature Secondary Structure AHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAA CCCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH LLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCE HVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCH EEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCC LNEGVSGHSHHHH CCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 11443104