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The map label for this gene is ybgT

Identifier: 157160217

GI number: 157160217

Start: 801049

End: 801162

Strand: Direct

Name: ybgT

Synonym: EcHS_A0787

Alternate gene names: 157160217

Gene position: 801049-801162 (Clockwise)

Preceding gene: 157160216

Following gene: 157160218

Centisome position: 17.25

GC content: 51.75

Gene sequence:

>114_bases
ATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGT
CGAATCAGGCAAAGCCGGTCAAGAAGACATCTGA

Upstream 100 bases:

>100_bases
TGCTCTACACCGCCTGGTGTTACTGGAAAATGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTG
TACTAAGTAAGGAGCTAAAA

Downstream 100 bases:

>100_bases
TGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTTTCCTTCGTGATGGCGCTTCTG
TTAGCAGGATGTATGTTTTG

Product: cyd operon protein YbgT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 37; Mature: 37

Protein sequence:

>37_residues
MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI

Sequences:

>Translated_37_residues
MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI
>Mature_37_residues
MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI

Specific function: Unknown

COG id: COG4890

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yccB

Homologues:

Organism=Escherichia coli, GI87081780, Length=37, Percent_Identity=100, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBGT_ECOLI (P56100)

Other databases:

- EMBL:   J03939
- EMBL:   U30934
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_001372.1
- RefSeq:   YP_588444.1
- STRING:   P56100
- EnsemblBacteria:   EBESCT00000002766
- EnsemblBacteria:   EBESCT00000014682
- GeneID:   1450246
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0724
- KEGG:   eco:b4515
- EchoBASE:   EB4075
- EcoGene:   EG14329
- eggNOG:   COG4890
- GeneTree:   EBGT00050000011980
- HOGENOM:   HBG644326
- ProtClustDB:   CLSK2306446
- BioCyc:   EcoCyc:MONOMER0-2663
- Genevestigator:   P56100
- InterPro:   IPR011724
- InterPro:   IPR012994
- TIGRFAMs:   TIGR02106

Pfam domain/function: PF08173 YbgT_YccB

EC number: NA

Molecular weight: Translated: 4042; Mature: 4042

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc234d10)-;

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2843510; 9278503; 7984428; 9068659