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The map label for this gene is lptE

Identifier: 157160136

GI number: 157160136

Start: 707690

End: 708271

Strand: Reverse

Name: lptE

Synonym: EcHS_A0693

Alternate gene names: 157160136

Gene position: 708271-707690 (Counterclockwise)

Preceding gene: 157160137

Following gene: 157160135

Centisome position: 15.25

GC content: 52.23

Gene sequence:

>582_bases
GTGCGATATCTGGCAACATTGTTGTTATCTCTGGCGGTGTTAATCACCGCCGGGTGTGGCTGGCATCTGCGTGATACCAC
GCAGGTTCCTTCCACTATGAAGGTCATGATCCTGGACTCAGGCGATCCGAACGGGCCATTAAGCCGTGCGGTGCGTAACC
AGTTACGTCTGAATGGTGTCGAGTTGCTTGATAAAGAAACCACGCGTAAGGACGTTCCATCCTTGCGTTTGGGTAAAGTG
AGCATCGCGAAAGATACCGCATCGGTATTCCGTAACGGTCAAACAGCAGAGTATCAGATGATCATGACGGTTAATGCGAC
CGTGTTGATCCCCGGCCGTGATATCTACCCGATTAGCGCCAAAGTCTTCCGTTCGTTCTTCGATAACCCGCAAATGGCGT
TAGCGAAAGATAACGAACAAGACATGATCGTAAAAGAGATGTACGACCGTGCTGCCGAACAGCTGATTCGTAAGCTGCCA
AGCATCCGTGCTGCGGATATTCGTTCCGACGAAGAACAGACGTCGACCACAACGGATACTCCGGCAACGCCTGCACGCGT
CTCCACCACGCTGGGTAACTGA

Upstream 100 bases:

>100_bases
ATCTGGTAGCAAAATATCTTGATGGCGTTACTGTACGTAAAGTGATTTACGTACCAGGTAAACTCCTCAATCTGGTCGTT
GGCTAAGCGCGGGAGGAAGC

Downstream 100 bases:

>100_bases
TGATTCGGTTGTACCCGGAACAACTCCGCGCGCAGCTCAATGAAGGGCTGCGCGCGGCGTATCTTTTACTTGGTAACGAT
CCTCTGTTATTGCAGGAAAG

Product: LPS-assembly lipoprotein RlpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKV
SIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN

Sequences:

>Translated_193_residues
MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKV
SIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN
>Mature_193_residues
MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKV
SIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN

Specific function: Together with lptD, is involved in the assembly of LPS in the outer leaflet of the outer membrane

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptE lipoprotein family

Homologues:

Organism=Escherichia coli, GI1786860, Length=193, Percent_Identity=100, Blast_Score=395, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPTE_ECO24 (A7ZJ30)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001461809.1
- ProteinModelPortal:   A7ZJ30
- SMR:   A7ZJ30
- STRING:   A7ZJ30
- EnsemblBacteria:   EBESCT00000022254
- GeneID:   5589319
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_0667
- eggNOG:   COG2980
- GeneTree:   EBGT00050000011732
- HOGENOM:   HBG644504
- OMA:   TAGCGFH
- ProtClustDB:   PRK10796
- BioCyc:   ECOL331111:ECE24377A_0667-MONOMER
- HAMAP:   MF_01186
- InterPro:   IPR007485

Pfam domain/function: PF04390 RplB

EC number: NA

Molecular weight: Translated: 21357; Mature: 21357

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGV
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCH
ELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISA
HHHCCHHHHHCCCCCEECEEEHHHHHHHHHHCCCCCEEEEEEEECEEEEECCCCCCCCHH
KVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLPSIRAADIRSDEEQTSTTTDT
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCC
PATPARVSTTLGN
CCCCCCCCCCCCC
>Mature Secondary Structure
MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGV
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCH
ELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISA
HHHCCHHHHHCCCCCEECEEEHHHHHHHHHHCCCCCEEEEEEEECEEEEECCCCCCCCHH
KVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLPSIRAADIRSDEEQTSTTTDT
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCC
PATPARVSTTLGN
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA