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The map label for this gene is ybeB

Identifier: 157160132

GI number: 157160132

Start: 704804

End: 705121

Strand: Reverse

Name: ybeB

Synonym: EcHS_A0689

Alternate gene names: 157160132

Gene position: 705121-704804 (Counterclockwise)

Preceding gene: 157160133

Following gene: 157160131

Centisome position: 15.18

GC content: 50.94

Gene sequence:

>318_bases
TTGCAGGGTAAAGCACTCCAGGATTTTGTTATCGACAAAATTGATGACCTCAAAGGTCAGGACATCATCGCCTTAGACGT
TCAAGGCAAATCCAGCATCACCGACTGCATGATCATCTGTACGGGTACGTCCAGCCGTCATGTTATGTCCATTGCTGACC
ACGTTGTGCAGGAGTCTCGCGCAGCGGGCCTGTTACCGCTCGGCGTAGAAGGTGAAAACAGCGCCGACTGGATTGTCGTG
GATTTGGGCGATGTGATTGTCCATGTCATGCAGGAAGAGAGCCGTCGCCTGTATGAACTGGAAAAACTCTGGAGTTAA

Upstream 100 bases:

>100_bases
CTTTCGAAAGCCGATTCGGCGACAATTGTCCCGAAATCGCCTCTGGTTCAGGTATACTGACAGACCATTTTTATCTATTT
GATTCACCCAGGGGGAAAAC

Downstream 100 bases:

>100_bases
TGCGTGAAGCTGCAACTTGTCGCCGTGGGAACGAAAATGCCGGACTGGGTACAAACCGGTTTTACCGAGTACCTGCGTCG
TTTTCCGAAAGATATGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVV
DLGDVIVHVMQEESRRLYELEKLWS

Sequences:

>Translated_105_residues
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVV
DLGDVIVHVMQEESRRLYELEKLWS
>Mature_105_residues
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVV
DLGDVIVHVMQEESRRLYELEKLWS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=32.6732673267327, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081768, Length=105, Percent_Identity=100, Blast_Score=211, Evalue=8e-57,
Organism=Drosophila melanogaster, GI19923046, Length=88, Percent_Identity=32.9545454545455, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBEB_ECOL6 (P0AAT7)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_752658.1
- ProteinModelPortal:   P0AAT7
- SMR:   P0AAT7
- MINT:   MINT-1226360
- EnsemblBacteria:   EBESCT00000044072
- GeneID:   1035925
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c0728
- GeneTree:   EBGT00050000011065
- HOGENOM:   HBG584688
- OMA:   FQKHIRE
- ProtClustDB:   PRK11538
- InterPro:   IPR004394
- PANTHER:   PTHR21043
- TIGRFAMs:   TIGR00090

Pfam domain/function: PF02410 DUF143

EC number: NA

Molecular weight: Translated: 11582; Mature: 11582

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESR
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC
AAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS
CCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESR
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC
AAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS
CCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157