Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

Click here to switch to the map view.

The map label for this gene is yaiT [H]

Identifier: 157159886

GI number: 157159886

Start: 454195

End: 455721

Strand: Direct

Name: yaiT [H]

Synonym: EcHS_A0434

Alternate gene names: 157159886

Gene position: 454195-455721 (Clockwise)

Preceding gene: 157159884

Following gene: 157159889

Centisome position: 9.78

GC content: 43.35

Gene sequence:

>1527_bases
ATGCACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGC
AACTACTTATAATACATTCGGGTATCACGATGACGCAGTCACTCTATTCAATTGGGGCGACAATACTAAAACTGATCACG
ACTATTTGACGTATGGTGGCTATGTATACGACCATGCGGCTGATGGTTATTTTGATACTGTATTTAGTGGCGATACCGTT
AATGGTGTAATTTCTACTTATTATCTGAATCACGACTATGGAACAGATACCGCTAATACTCTGAATATTACGAACTCAAA
TATTCACGGTATGATTACTTCCGATCAGATCGGATACGGTGATTACGTCTGGACCAACGGTAGCGATTATACTGGTCATG
ATTGGGTAGATGGCGATATTTTCACTCTGAACATCGCGAACTCAACAATTGACGATGATTTTGATGCATTCTACTTCAAT
GATACTTATCTGGATGCAGACGGTAAAACGTCTAAAACAGATTATGATCGTCTGGTAACAGCTGCTCTTGGCACCGCTGT
AACTCTGGATGTTGAAAGTAACATCAATATCAGCAACAACTCCCATGTTGCAGGTATTACTCTGGTTCAAAACGATTTAG
GTAATGCGACTTACAATACTGAAGGTCATCAGTGGGACAACAATATCGTTGTTAATAATTCCACTGTAACTTCAGGTTCG
CTCTCAGAAGACGAACAATCAGATCGTGGTCATTTTGGCAACTCTGTTGAGCCAAGCGACTATGGTAATGGTGCATCAGG
TGCTGATGATGTTGCATTAGCCTTCATAGATGATGACACTTCTGATTATCGTATGGTCAACAACGTTACATTCAACAATT
CTCAGTTGCTTGGCGACGTTGTATTTGACAGTACCTGGAACGCTAACTTTGACGCGACGGGTCACCTGATTGACAACTCT
ACCACTGCTTACACTCATGGCGGTTGGGCTACTGACGATCAGAACGTCGATCACCTGAACCTGACTCTGAACAACACCAA
ATGGGTTGGTTCAGCGAATATTGATTATGACGTTGTTGTTGCTGACGAAGCCTTCTACGACGTTGCGCCAAACAGCCTGA
ACCCGTACGCTTCTTACTCTGAAGATGGCTGGAATCGTGTTGATAACGCTAACGCATTCCAGAGTGGCGTATTCGATGTT
GTTCTGAACAATGGTTCTGATTGGGAAACCACGAAAGATTCTCTGATCGATACCCTGGCTATCAACAGCGGTTCTCAGGT
TAACGTGAGTGCAGATTCTTCCCTGACTTCCGACACCATCACTCTGAACGGTAGTTCTTCAATGGAAGTTAACGGTGAAG
TTAACACTGATCACCTGATCATTGATACCTTCTCTACTGTTAACTTCGGTGAAGATACTGCTTCAGCTTGGACATCTGCA
CCGCTGTACGCCAACACCATTACCGTTACTAACGGTGGTGTGCTGGATGTAAACACCAACATGAATGAATCGCCACGGAT
AATCTAG

Upstream 100 bases:

>100_bases
GTCTGTAACGCAGCATAATCATTAGCGCGAAACATAATATGTTTTCTATGCATTGATAATTGATGGATCAACTTATTACG
TCCCTGAGGAGGGATGACAA

Downstream 100 bases:

>100_bases
ACACTTCCGAGCCGTTGATAATACTGGTTTTCATATTCTGTCGGTGACATCTGTTCGCTAGAACCATGCCGACGCTTACT
GTTATAAAACATTTCGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MHSWKKKLVVSQLALACTLAITSQANATTYNTFGYHDDAVTLFNWGDNTKTDHDYLTYGGYVYDHAADGYFDTVFSGDTV
NGVISTYYLNHDYGTDTANTLNITNSNIHGMITSDQIGYGDYVWTNGSDYTGHDWVDGDIFTLNIANSTIDDDFDAFYFN
DTYLDADGKTSKTDYDRLVTAALGTAVTLDVESNINISNNSHVAGITLVQNDLGNATYNTEGHQWDNNIVVNNSTVTSGS
LSEDEQSDRGHFGNSVEPSDYGNGASGADDVALAFIDDDTSDYRMVNNVTFNNSQLLGDVVFDSTWNANFDATGHLIDNS
TTAYTHGGWATDDQNVDHLNLTLNNTKWVGSANIDYDVVVADEAFYDVAPNSLNPYASYSEDGWNRVDNANAFQSGVFDV
VLNNGSDWETTKDSLIDTLAINSGSQVNVSADSSLTSDTITLNGSSSMEVNGEVNTDHLIIDTFSTVNFGEDTASAWTSA
PLYANTITVTNGGVLDVNTNMNESPRII

Sequences:

>Translated_508_residues
MHSWKKKLVVSQLALACTLAITSQANATTYNTFGYHDDAVTLFNWGDNTKTDHDYLTYGGYVYDHAADGYFDTVFSGDTV
NGVISTYYLNHDYGTDTANTLNITNSNIHGMITSDQIGYGDYVWTNGSDYTGHDWVDGDIFTLNIANSTIDDDFDAFYFN
DTYLDADGKTSKTDYDRLVTAALGTAVTLDVESNINISNNSHVAGITLVQNDLGNATYNTEGHQWDNNIVVNNSTVTSGS
LSEDEQSDRGHFGNSVEPSDYGNGASGADDVALAFIDDDTSDYRMVNNVTFNNSQLLGDVVFDSTWNANFDATGHLIDNS
TTAYTHGGWATDDQNVDHLNLTLNNTKWVGSANIDYDVVVADEAFYDVAPNSLNPYASYSEDGWNRVDNANAFQSGVFDV
VLNNGSDWETTKDSLIDTLAINSGSQVNVSADSSLTSDTITLNGSSSMEVNGEVNTDHLIIDTFSTVNFGEDTASAWTSA
PLYANTITVTNGGVLDVNTNMNESPRII
>Mature_508_residues
MHSWKKKLVVSQLALACTLAITSQANATTYNTFGYHDDAVTLFNWGDNTKTDHDYLTYGGYVYDHAADGYFDTVFSGDTV
NGVISTYYLNHDYGTDTANTLNITNSNIHGMITSDQIGYGDYVWTNGSDYTGHDWVDGDIFTLNIANSTIDDDFDAFYFN
DTYLDADGKTSKTDYDRLVTAALGTAVTLDVESNINISNNSHVAGITLVQNDLGNATYNTEGHQWDNNIVVNNSTVTSGS
LSEDEQSDRGHFGNSVEPSDYGNGASGADDVALAFIDDDTSDYRMVNNVTFNNSQLLGDVVFDSTWNANFDATGHLIDNS
TTAYTHGGWATDDQNVDHLNLTLNNTKWVGSANIDYDVVVADEAFYDVAPNSLNPYASYSEDGWNRVDNANAFQSGVFDV
VLNNGSDWETTKDSLIDTLAINSGSQVNVSADSSLTSDTITLNGSSSMEVNGEVNTDHLIIDTFSTVNFGEDTASAWTSA
PLYANTITVTNGGVLDVNTNMNESPRII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR011050
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 55130; Mature: 55130

Theoretical pI: Translated: 3.71; Mature: 3.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSWKKKLVVSQLALACTLAITSQANATTYNTFGYHDDAVTLFNWGDNTKTDHDYLTYGG
CCHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEECC
YVYDHAADGYFDTVFSGDTVNGVISTYYLNHDYGTDTANTLNITNSNIHGMITSDQIGYG
EEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCC
DYVWTNGSDYTGHDWVDGDIFTLNIANSTIDDDFDAFYFNDTYLDADGKTSKTDYDRLVT
CEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECEEECCCCCCCCCHHHHHHH
AALGTAVTLDVESNINISNNSHVAGITLVQNDLGNATYNTEGHQWDNNIVVNNSTVTSGS
HHCCEEEEEEECCCEEECCCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEECCEECCCC
LSEDEQSDRGHFGNSVEPSDYGNGASGADDVALAFIDDDTSDYRMVNNVTFNNSQLLGDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEEEE
VFDSTWNANFDATGHLIDNSTTAYTHGGWATDDQNVDHLNLTLNNTKWVGSANIDYDVVV
EECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEE
ADEAFYDVAPNSLNPYASYSEDGWNRVDNANAFQSGVFDVVLNNGSDWETTKDSLIDTLA
ECCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCHHHHEEEEE
INSGSQVNVSADSSLTSDTITLNGSSSMEVNGEVNTDHLIIDTFSTVNFGEDTASAWTSA
ECCCCEEEEECCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHHHCCC
PLYANTITVTNGGVLDVNTNMNESPRII
CEEEEEEEEECCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MHSWKKKLVVSQLALACTLAITSQANATTYNTFGYHDDAVTLFNWGDNTKTDHDYLTYGG
CCHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEECC
YVYDHAADGYFDTVFSGDTVNGVISTYYLNHDYGTDTANTLNITNSNIHGMITSDQIGYG
EEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCC
DYVWTNGSDYTGHDWVDGDIFTLNIANSTIDDDFDAFYFNDTYLDADGKTSKTDYDRLVT
CEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECEEECCCCCCCCCHHHHHHH
AALGTAVTLDVESNINISNNSHVAGITLVQNDLGNATYNTEGHQWDNNIVVNNSTVTSGS
HHCCEEEEEEECCCEEECCCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEECCEECCCC
LSEDEQSDRGHFGNSVEPSDYGNGASGADDVALAFIDDDTSDYRMVNNVTFNNSQLLGDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEEEE
VFDSTWNANFDATGHLIDNSTTAYTHGGWATDDQNVDHLNLTLNNTKWVGSANIDYDVVV
EECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEE
ADEAFYDVAPNSLNPYASYSEDGWNRVDNANAFQSGVFDVVLNNGSDWETTKDSLIDTLA
ECCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCHHHHEEEEE
INSGSQVNVSADSSLTSDTITLNGSSSMEVNGEVNTDHLIIDTFSTVNFGEDTASAWTSA
ECCCCEEEEECCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHHHCCC
PLYANTITVTNGGVLDVNTNMNESPRII
CEEEEEEEEECCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]