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The map label for this gene is yahJ [H]

Identifier: 157159837

GI number: 157159837

Start: 402147

End: 403391

Strand: Direct

Name: yahJ [H]

Synonym: EcHS_A0384

Alternate gene names: 157159837

Gene position: 402147-403391 (Clockwise)

Preceding gene: 157159836

Following gene: 157159838

Centisome position: 8.66

GC content: 56.22

Gene sequence:

>1245_bases
ATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAACGGTGTGGCGGT
GCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCAGCATCCGG
ACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGTTGATGCTACCCACCACTCGCGACATGCATATTCATCTCGACAAA
ACCTTCTACGGCGGGCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACTATCCAGGACATGATCAAACTCGAGCAGAA
AATGCTGCCGGAGTTACAACCGTATACGCAGGAGCGGGCGGAAAAACTGATCGATCTATTGCAGTCGAAAGGCACCACCA
TTGCCCGCAGCCACTGCAATATCGAACCGGTTTCCGGCCTGAAAAATCTGCAGAATTTGCAGGCGGTGCTGGCGCGACGT
CAGGCGGGCTTCGAGTGTGAAATCGTCGCCTTCCCGCAGCACGGTTTGCTGCTGTCGAAATCGGAACCCTTAATGCGCGA
AGCGATGCAGGCGGGTGCGCATTACGTCGGCGGGCTGGACCCGACCAGTGTTGATGGCGCGATGGAAAAATCCCTCGACA
CCATGTTTCAGATTGCGCTGGACTACGACAAAGGTGTCGATATTCACCTGCACGAAACCACTCCGTCGGGCGTGGCAGCC
ATCAATTATATGGTTGAAACGGTAGAGAAAACGCCGCAACTGAAAGGTAAGCTGACCATCAGCCACGCCTTTGCGCTGGC
TACGCTCAACGAACAACAGGTCGATGCGCTGGCGAATCGGATGGCGGCGCAGCAAATTTCTATCGCCTCGACGGTGCCGA
TTGGCACGCTGCATATGCCGCTCAAACAGTTGCACGACAAAGGCGTAAAAGTGATGACTGGCACTGACAGCGTTATCGAC
CACTGGTCGCCTTATGGTCTGGGCGACATGCTGGAAAAAGCCAATCTCTACGCGCAGCTCTATATTCGTCCTAACGAACA
GAACCTCTCCCGTTCGCTGTTTCTAGCCACTGGCGATGTATTGCCGCTGAATGAAAAAGGCGAGCGTGTATGGCCAAAAG
CGCAGGATGATGCCAGCTTTGTGCTGGTGGACGCCTCCTGTTCCGCCGAGGCGGTGGCGCGTATCTCGCCGAGAACCGCA
ACGTTCCATAAAGGGCAACTGGTGTGGGGGAGTGTGGCAGGTTGA

Upstream 100 bases:

>100_bases
GAGCGGTAAGATGGTCACCGCCGCCGCGCTGTTTGGTACCTCTGTGCCGCTCGCCCATGCGGCGGTAGCTGGCACCCTAA
ACTGCGAAGCGAACAACACC

Downstream 100 bases:

>100_bases
TGCGCATTTGAAACGCCTGCAACGGTGAATTGTAAGAGATTTAAGCCCAGGGAGTGGGGCGGGAATGGTTTGCTAATGAA
TGATCCTGAACTTTATAATC

Product: deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDK
TFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARR
QAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAA
INYMVETVEKTPQLKGKLTISHAFALATLNEQQVDALANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVID
HWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTA
TFHKGQLVWGSVAG

Sequences:

>Translated_414_residues
MKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDK
TFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARR
QAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAA
INYMVETVEKTPQLKGKLTISHAFALATLNEQQVDALANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVID
HWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTA
TFHKGQLVWGSVAG
>Mature_414_residues
MKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDK
TFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARR
QAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAA
INYMVETVEKTPQLKGKLTISHAFALATLNEQQVDALANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVID
HWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTA
TFHKGQLVWGSVAG

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786517, Length=414, Percent_Identity=98.792270531401, Blast_Score=855, Evalue=0.0,
Organism=Escherichia coli, GI1786531, Length=323, Percent_Identity=26.0061919504644, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45702; Mature: 45702

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHY
CCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCC
DAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERA
CCCCEEECCCCCCEEEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
EKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSK
HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECC
SEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAA
CCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCHHHH
INYMVETVEKTPQLKGKLTISHAFALATLNEQQVDALANRMAAQQISIASTVPIGTLHMP
HHHHHHHHHHCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDV
HHHHHHCCCEEEECCCHHHHCCCCCCHHHHHHHCCEEEEEEEECCHHCCCEEEEEEECCE
LPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
EECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCEEEECCEEEEEECCC
>Mature Secondary Structure
MKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHY
CCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCC
DAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERA
CCCCEEECCCCCCEEEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
EKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSK
HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECC
SEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAA
CCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCHHHH
INYMVETVEKTPQLKGKLTISHAFALATLNEQQVDALANRMAAQQISIASTVPIGTLHMP
HHHHHHHHHHCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDV
HHHHHHCCCEEEECCCHHHHCCCCCCHHHHHHHCCEEEEEEEECCHHCCCEEEEEEECCE
LPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
EECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]