Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157159781
Identifier: 157159781
GI number: 157159781
Start: 330240
End: 332150
Strand: Direct
Name: 157159781
Synonym: EcHS_A0327
Alternate gene names: NA
Gene position: 330240-332150 (Clockwise)
Preceding gene: 157159780
Following gene: 157159782
Centisome position: 7.11
GC content: 45.89
Gene sequence:
>1911_bases ATGACTGACACCAATTACCTGATCTCTATGCCGTCTACACCTTTTTCGGCGCCACGAGCATTTAAATCAGTGGCGAACGG GAAAATCTATATCGGAAACCCTGACACTGACCCGGTAAATCCTGCTAACCAAATTCCGGTATATGCCGTTAATGAGAATG GATCCGAGGTTCAGGTTTCTCAGCCAATCATCATTAACGCTGGAGGCTTCCCTGTTTATAACGGGCAGATTATGAAGTTC ATCACCAAACAGAACTTCAGCATGGCGGTGTATGATGCATATGGGGCGCAGCAGTTTTACTGGATTAATGTTGCAAATAT GGACCCAAACTCTGCGTATCTGGAAGCGGTTAATGATGTTCTTGCAATGCTGGGCTCAAGCGATGGCGCAAAACTGATAG GTGGAATGAGCTTTCTTACAGCGGAAATGTACTCTCATCTTGTTGAAGGGATGGACTGGAGGAAAGCAATTCAAGCTGCT ATAGACCAAGCTCACCAGAACTATTTAGCCGGAAGCGGCCCAACCAATATTCTCATTGGAGGTGAATTCTCCGTTACTCT CAATCCTAATTCAACTTTGATACCTGGTGAGGTTGCTGCGGGTCGAGGTGCGCTGTGTATGCGTAGTGGTGTAACACTGA TGGGCGGCGGAGCAATCACGCTTGATGGCAATTTTACTGGCTCAGCCAGCGGCGCAATCATTACAAACTGGGAAGGCGCC GCCGATAACTGCAAGATTCAGGGGATCACGCTTAACGGCAGCCGTGGCACCGCTGCCGGAACGGGGATTACCTGCATTAA TATCTTGGACTCGGATAATGTCACTATTGATAACGTTAAGGCGATAGATAGCACTTCTGGAGGGATTTATTTACGCCGAG CTAACAATACGGTTTATGGCTGTTCTAACTCAAGAATTATGAACTGCTACGTTCACAACGTTGAATATATTGGCATTCAG TGTGAACGCCCCAACGGGATGACCATTACGGGATGTGCCGTAGCCTCCTGCGGTGATAATGGCATTGATATCTTTGGTAA CGTAACTGACGAATCTGGACAGGGAGTTGCGGAGGATGTTGTTGTTAGTAATAACACTATCCGTGATGTAAGCGTAGGAG TGTTCATCGAATCATGCGGAAACGTGGCAATATCTTCGTGCCGTATTTCAGGATTTAGTAACTCTGGTGTTTTCTTTAAC CGGATAAATACAGCTGCGTATAATTGTTCTGTAATTGGATGCACGATAACAGGGGCGGATATTACCTCCAGCCAGGGCAT CCGCTGGAAGAATGCAGTTGGTTACACTCGCGTTTATAACAACACACTAAAAAACTGTATTGACTCCTTTGTGACAACTG GAGGGATGATTTACGTTGATATTGGGGTGAATAACCATGAAAGCATTGGCAGGTGTTTTCTTTACGTTCCCAAAAAATCT AACGGATGTGTCTATACAAGAATGGTTCAGCAGGTCTACAACGGAGTTCAGACAGATGGCATACCGTACAACACGACACC TCGTGGTTGGCCATCCGCAAACAACACTAGGTACTATCGCTGTTCATTCACCGCGCCGTACATGATGTATTCCGCTACGA CTGGGGAAGATAACCTCATTCGGGCTACAGGCAATTTGCCATTCAACAGTGGCTGGGGGCCTGCTTACTCGCTATACAAT ACGATTGTTTCTGGAGAAACAGTAATAGCCATGGGGAGCTCGCTACTGTCTGCCGGTGAATACATGCTAATAAACGGTTA TTATTATTTAGTTTATAGCGTCACATCATCCTATGCTGTAGTAAGGAAATGGGATGTATCCAGTCAGGACTATATTGCCG GAGACTACACATCTTATTTAAATAGCGCATACGCATATTCCATCTTCAGAGCTGCTTGGGGAACACTATGA
Upstream 100 bases:
>100_bases CGTAACCTACTGGATAAATCAACAATCGTACCATTTCGGTATGTAACTATAGCTTACCGCAGCTCTGCTGTGGGGACTAA TTGCGCCAGGAGCACATCAA
Downstream 100 bases:
>100_bases CTTACATGAAAGGTGATTACATATCGACGAACTCTCGCTATGGCGAATCGAAGGTAGGATGTTTTGCCTACATAGATGAC ACCGTGAAAGATGGAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Tailspike Protein; Tail Spike Protein; APSE-2 Prophage; Endo-Alpha-Sialidase
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MTDTNYLISMPSTPFSAPRAFKSVANGKIYIGNPDTDPVNPANQIPVYAVNENGSEVQVSQPIIINAGGFPVYNGQIMKF ITKQNFSMAVYDAYGAQQFYWINVANMDPNSAYLEAVNDVLAMLGSSDGAKLIGGMSFLTAEMYSHLVEGMDWRKAIQAA IDQAHQNYLAGSGPTNILIGGEFSVTLNPNSTLIPGEVAAGRGALCMRSGVTLMGGGAITLDGNFTGSASGAIITNWEGA ADNCKIQGITLNGSRGTAAGTGITCINILDSDNVTIDNVKAIDSTSGGIYLRRANNTVYGCSNSRIMNCYVHNVEYIGIQ CERPNGMTITGCAVASCGDNGIDIFGNVTDESGQGVAEDVVVSNNTIRDVSVGVFIESCGNVAISSCRISGFSNSGVFFN RINTAAYNCSVIGCTITGADITSSQGIRWKNAVGYTRVYNNTLKNCIDSFVTTGGMIYVDIGVNNHESIGRCFLYVPKKS NGCVYTRMVQQVYNGVQTDGIPYNTTPRGWPSANNTRYYRCSFTAPYMMYSATTGEDNLIRATGNLPFNSGWGPAYSLYN TIVSGETVIAMGSSLLSAGEYMLINGYYYLVYSVTSSYAVVRKWDVSSQDYIAGDYTSYLNSAYAYSIFRAAWGTL
Sequences:
>Translated_636_residues MTDTNYLISMPSTPFSAPRAFKSVANGKIYIGNPDTDPVNPANQIPVYAVNENGSEVQVSQPIIINAGGFPVYNGQIMKF ITKQNFSMAVYDAYGAQQFYWINVANMDPNSAYLEAVNDVLAMLGSSDGAKLIGGMSFLTAEMYSHLVEGMDWRKAIQAA IDQAHQNYLAGSGPTNILIGGEFSVTLNPNSTLIPGEVAAGRGALCMRSGVTLMGGGAITLDGNFTGSASGAIITNWEGA ADNCKIQGITLNGSRGTAAGTGITCINILDSDNVTIDNVKAIDSTSGGIYLRRANNTVYGCSNSRIMNCYVHNVEYIGIQ CERPNGMTITGCAVASCGDNGIDIFGNVTDESGQGVAEDVVVSNNTIRDVSVGVFIESCGNVAISSCRISGFSNSGVFFN RINTAAYNCSVIGCTITGADITSSQGIRWKNAVGYTRVYNNTLKNCIDSFVTTGGMIYVDIGVNNHESIGRCFLYVPKKS NGCVYTRMVQQVYNGVQTDGIPYNTTPRGWPSANNTRYYRCSFTAPYMMYSATTGEDNLIRATGNLPFNSGWGPAYSLYN TIVSGETVIAMGSSLLSAGEYMLINGYYYLVYSVTSSYAVVRKWDVSSQDYIAGDYTSYLNSAYAYSIFRAAWGTL >Mature_635_residues TDTNYLISMPSTPFSAPRAFKSVANGKIYIGNPDTDPVNPANQIPVYAVNENGSEVQVSQPIIINAGGFPVYNGQIMKFI TKQNFSMAVYDAYGAQQFYWINVANMDPNSAYLEAVNDVLAMLGSSDGAKLIGGMSFLTAEMYSHLVEGMDWRKAIQAAI DQAHQNYLAGSGPTNILIGGEFSVTLNPNSTLIPGEVAAGRGALCMRSGVTLMGGGAITLDGNFTGSASGAIITNWEGAA DNCKIQGITLNGSRGTAAGTGITCINILDSDNVTIDNVKAIDSTSGGIYLRRANNTVYGCSNSRIMNCYVHNVEYIGIQC ERPNGMTITGCAVASCGDNGIDIFGNVTDESGQGVAEDVVVSNNTIRDVSVGVFIESCGNVAISSCRISGFSNSGVFFNR INTAAYNCSVIGCTITGADITSSQGIRWKNAVGYTRVYNNTLKNCIDSFVTTGGMIYVDIGVNNHESIGRCFLYVPKKSN GCVYTRMVQQVYNGVQTDGIPYNTTPRGWPSANNTRYYRCSFTAPYMMYSATTGEDNLIRATGNLPFNSGWGPAYSLYNT IVSGETVIAMGSSLLSAGEYMLINGYYYLVYSVTSSYAVVRKWDVSSQDYIAGDYTSYLNSAYAYSIFRAAWGTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68071; Mature: 67940
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTNYLISMPSTPFSAPRAFKSVANGKIYIGNPDTDPVNPANQIPVYAVNENGSEVQVS CCCCCEEEECCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEC QPIIINAGGFPVYNGQIMKFITKQNFSMAVYDAYGAQQFYWINVANMDPNSAYLEAVNDV CCEEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHH LAMLGSSDGAKLIGGMSFLTAEMYSHLVEGMDWRKAIQAAIDQAHQNYLAGSGPTNILIG HHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC GEFSVTLNPNSTLIPGEVAAGRGALCMRSGVTLMGGGAITLDGNFTGSASGAIITNWEGA CEEEEEECCCCEECCCCCCCCCCCEEECCCCEEEECCEEEECCCCCCCCCCEEEECCCCC ADNCKIQGITLNGSRGTAAGTGITCINILDSDNVTIDNVKAIDSTSGGIYLRRANNTVYG CCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEECCCEEEE CSNSRIMNCYVHNVEYIGIQCERPNGMTITGCAVASCGDNGIDIFGNVTDESGQGVAEDV CCCCEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEE VVSNNTIRDVSVGVFIESCGNVAISSCRISGFSNSGVFFNRINTAAYNCSVIGCTITGAD EECCCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEEECCEEEEEEEEEEEEECCC ITSSQGIRWKNAVGYTRVYNNTLKNCIDSFVTTGGMIYVDIGVNNHESIGRCFLYVPKKS CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECC NGCVYTRMVQQVYNGVQTDGIPYNTTPRGWPSANNTRYYRCSFTAPYMMYSATTGEDNLI CCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCEE RATGNLPFNSGWGPAYSLYNTIVSGETVIAMGSSLLSAGEYMLINGYYYLVYSVTSSYAV EEECCCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHCCCCEEEEECEEEEEEEECCCEEE VRKWDVSSQDYIAGDYTSYLNSAYAYSIFRAAWGTL EEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDTNYLISMPSTPFSAPRAFKSVANGKIYIGNPDTDPVNPANQIPVYAVNENGSEVQVS CCCCEEEECCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEC QPIIINAGGFPVYNGQIMKFITKQNFSMAVYDAYGAQQFYWINVANMDPNSAYLEAVNDV CCEEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHH LAMLGSSDGAKLIGGMSFLTAEMYSHLVEGMDWRKAIQAAIDQAHQNYLAGSGPTNILIG HHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC GEFSVTLNPNSTLIPGEVAAGRGALCMRSGVTLMGGGAITLDGNFTGSASGAIITNWEGA CEEEEEECCCCEECCCCCCCCCCCEEECCCCEEEECCEEEECCCCCCCCCCEEEECCCCC ADNCKIQGITLNGSRGTAAGTGITCINILDSDNVTIDNVKAIDSTSGGIYLRRANNTVYG CCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEECCCEEEE CSNSRIMNCYVHNVEYIGIQCERPNGMTITGCAVASCGDNGIDIFGNVTDESGQGVAEDV CCCCEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEE VVSNNTIRDVSVGVFIESCGNVAISSCRISGFSNSGVFFNRINTAAYNCSVIGCTITGAD EECCCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEEECCEEEEEEEEEEEEECCC ITSSQGIRWKNAVGYTRVYNNTLKNCIDSFVTTGGMIYVDIGVNNHESIGRCFLYVPKKS CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECC NGCVYTRMVQQVYNGVQTDGIPYNTTPRGWPSANNTRYYRCSFTAPYMMYSATTGEDNLI CCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCEE RATGNLPFNSGWGPAYSLYNTIVSGETVIAMGSSLLSAGEYMLINGYYYLVYSVTSSYAV EEECCCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHCCCCEEEEECEEEEEEEECCCEEE VRKWDVSSQDYIAGDYTSYLNSAYAYSIFRAAWGTL EEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA