Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157159770
Identifier: 157159770
GI number: 157159770
Start: 320115
End: 321068
Strand: Direct
Name: 157159770
Synonym: EcHS_A0316
Alternate gene names: NA
Gene position: 320115-321068 (Clockwise)
Preceding gene: 157159769
Following gene: 157159771
Centisome position: 6.89
GC content: 50.1
Gene sequence:
>954_bases ATGGCGGATTCGAATCTCAATGTGCCGGTAATCATTCAGGCTACACGGCTCGACACATCAGTCCTTCCACGCAATATCTT CTCGCAGTCGTATCTGCTGTACGTTATCGCACAGGGCACTGATGTTGGTAACGTGGCTAACAAAGCCAACGAGGCCGGAC AGGGCGCTTATGATGCACAGGTCAGGAACGATGAGCAGGATGTCACCCTTGCAGACCATGAATCCAGAATTGAAGCTGCT GAAGCAACTCTCATCAATCATGAACATAGAATTGCAGCAGCGGAAAGCACTCTTGCAGAACATGAAACAAGGATTACGGA TGCTGAAACAGAGCTGGCTGATCACGAGACGCGAATTGCTGCCAATGAATCTGAGTTAGCAAACCATGATGCGCGCATAA CTCAGAATACAGCCGATATCGACGCACTTGATACCAGGCTCACAGCGGCAGAGGGAAGTATTTCGACGCTACAAAGCACA GTTGGTGATCACTCAACAAGAATATCTGCGCTTGAGTATGCCACCACTCGCAAGAAATCAGAGGTTGTTTACTCTGGCGT ATCTGTAACCATCCCGACAGCGCCGACCAACCTTGTTAGCCTGCTGAAAACGCTCACTCCGTCATCCGGCACGTTGGCAC CATTCTTCGACACCGTTAACAACAAGATGGTTGTGTTCAACGAGAACAAAACCCTGTTCTTCAAGCTGTCGATTGTCGGG ACGTGGCCCAGTGGAACCGCCAACAGGTCAATGCAGCTAACCTTTTCCGGCTCTGTTCCTGACACACTGGTAAGCAGTCG CAACTCGGCGACAACGACCGATAACATCCTGTTAGCTACGTTCTTCAGCGTGGATAAAGACGGCTTTCTTGCCACAAATG GCAGCACGTTAACCATTCAGTCGAATGGTGCGGCGTTTACTGCCACAACCATCAAGATAATCGCGGAGCAGTAA
Upstream 100 bases:
>100_bases GGAAGCGAGTAGGGCGCATCAGGAAAAATGTCGGCTTCAAATTGCGCGTTATCACGAAGTCACCTGTCACTCTGTCTGGC TGCCAGATAAGGATTGAGTA
Downstream 100 bases:
>100_bases TGATTCAGTTCAAACCAACGCGAAACATCGACCTGATAGAAGCCGTGGGAAATCACCCCGACATTATCACCGGGAGCAAC AACGGTGATGGATACGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: Packaged DNA Stabilization Protein; Packaged DNA Stabilization Protein Phage; Head Completion Protein
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MADSNLNVPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQVRNDEQDVTLADHESRIEAA EATLINHEHRIAAAESTLAEHETRITDAETELADHETRIAANESELANHDARITQNTADIDALDTRLTAAEGSISTLQST VGDHSTRISALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVG TWPSGTANRSMQLTFSGSVPDTLVSSRNSATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATTIKIIAEQ
Sequences:
>Translated_317_residues MADSNLNVPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQVRNDEQDVTLADHESRIEAA EATLINHEHRIAAAESTLAEHETRITDAETELADHETRIAANESELANHDARITQNTADIDALDTRLTAAEGSISTLQST VGDHSTRISALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVG TWPSGTANRSMQLTFSGSVPDTLVSSRNSATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATTIKIIAEQ >Mature_316_residues ADSNLNVPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQVRNDEQDVTLADHESRIEAAE ATLINHEHRIAAAESTLAEHETRITDAETELADHETRIAANESELANHDARITQNTADIDALDTRLTAAEGSISTLQSTV GDHSTRISALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVGT WPSGTANRSMQLTFSGSVPDTLVSSRNSATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATTIKIIAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33970; Mature: 33839
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSNLNVPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQ CCCCCCCCEEEEEEECCCCHHCCHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCCCEECE VRNDEQDVTLADHESRIEAAEATLINHEHRIAAAESTLAEHETRITDAETELADHETRIA ECCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEE ANESELANHDARITQNTADIDALDTRLTAAEGSISTLQSTVGDHSTRISALEYATTRKKS CCHHHHHCCCCEEECCCCCCHHHHHEEEECCCCHHHHHHHHCCCCHHEEHHHHHHHCCCC EVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVG CEEEECEEEEECCCCHHHHHHHHHHCCCCCCEEHHHHCCCCEEEEEECCCEEEEEEEEEE TWPSGTANRSMQLTFSGSVPDTLVSSRNSATTTDNILLATFFSVDKDGFLATNGSTLTIQ ECCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEECCCEEEEE SNGAAFTATTIKIIAEQ CCCCEEEEEEEEEEECC >Mature Secondary Structure ADSNLNVPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQ CCCCCCCEEEEEEECCCCHHCCHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCCCEECE VRNDEQDVTLADHESRIEAAEATLINHEHRIAAAESTLAEHETRITDAETELADHETRIA ECCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEE ANESELANHDARITQNTADIDALDTRLTAAEGSISTLQSTVGDHSTRISALEYATTRKKS CCHHHHHCCCCEEECCCCCCHHHHHEEEECCCCHHHHHHHHCCCCHHEEHHHHHHHCCCC EVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVG CEEEECEEEEECCCCHHHHHHHHHHCCCCCCEEHHHHCCCCEEEEEECCCEEEEEEEEEE TWPSGTANRSMQLTFSGSVPDTLVSSRNSATTTDNILLATFFSVDKDGFLATNGSTLTIQ ECCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEECCCEEEEE SNGAAFTATTIKIIAEQ CCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA