| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157159746
Identifier: 157159746
GI number: 157159746
Start: 302940
End: 303839
Strand: Direct
Name: 157159746
Synonym: EcHS_A0292
Alternate gene names: NA
Gene position: 302940-303839 (Clockwise)
Preceding gene: 157159745
Following gene: 157159747
Centisome position: 6.52
GC content: 45.44
Gene sequence:
>900_bases ATGAGTAACATATCTAATCTAGCCGAAGCCAGAGAGGCCAGAAGGCTACAACAACCGCATCAAAGCAGCGGTAAGGGGTA TGCCTTGCTGCACCGTAAAATTATGGATGTGCCGTTTTACAAGGACGCAGAAGCAGCGCATCTGTGGGTTCACTTAATCC TCAAAGCAAAGCATACGCCTGAGTATGTAATGACTGACGCAGGAGAAATTCTGGTAGGCAGAGGGAAGCTACTTGGCGGT AGAAACTCTCTGGCGTTTGAAACAGGACTCAAACCAGATCGCGTTCAGTACCTGCTTAGAAAGTTCAAAAAACTCGGCAT GATTGACTGGGTTTCACACGGTAAATTCTCAGTTTTCTCGGTAGAGAAATATGACGATTATCAGTCAAATTTTGTACCAG CAGATTACCAGCAAATTACCACCTCAAAGCCAGCAATACCATTGCCTGTAAGCAATACTGTACCAGCAGATTACCAGCAA ATTACCACAGATAAAGAATATAATAATATTATCTCTAATACTGACGTATTAGAGAGTGCCACAGCAGACAAAAAGTCTGA CAAGAAAAAACCTTCCGTCAGCTGTCAGGATGTAGTCGATGCTTACCACGAAATCCTTCCTGAAGCGCCAAGAATCCGCG CACTGAATGACAAGCGTAAAAACCAGATCCGAACGTTCTGGCGCAAAGCCGGAGTGATAACCCGCCAGCTTGACGGGCAT GGGTTCACGATGCAGGACTGGAGAAATTATTTGAGCTACGTAGGCGAAAATTGCCGATGGATGTTCGAAGAACGCCCAAA CCATCAACGCGGAACCGTCTGGCACAAAAAGGGATTTGATTTCCTGCTTAACGATAATACCTACCTGAAAGTTCGTGAGG GTGAACACGATGACCGATAA
Upstream 100 bases:
>100_bases AAACACATACTACGTGATCGCTTCCTGTCCAGCTTCAAGCAGCCTGGTCGATTCCGGGCTGAGTTGGAAAAAGTGAAGCT GATGCAGAAGGAGAAAGGTC
Downstream 100 bases:
>100_bases TTTTTATGCGCCGCCCCATAGCATCGAGGCAGAGCAGGCGGTGATTGGTGGATTGCTTCTGGATGATGACAGCAGTGAGC GCGTCCAGAAAGTTCTGGCG
Product: putative replication protein O
Products: NA
Alternate protein names: Phage Replication Protein O; Phage O Protein Family
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSNISNLAEAREARRLQQPHQSSGKGYALLHRKIMDVPFYKDAEAAHLWVHLILKAKHTPEYVMTDAGEILVGRGKLLGG RNSLAFETGLKPDRVQYLLRKFKKLGMIDWVSHGKFSVFSVEKYDDYQSNFVPADYQQITTSKPAIPLPVSNTVPADYQQ ITTDKEYNNIISNTDVLESATADKKSDKKKPSVSCQDVVDAYHEILPEAPRIRALNDKRKNQIRTFWRKAGVITRQLDGH GFTMQDWRNYLSYVGENCRWMFEERPNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR
Sequences:
>Translated_299_residues MSNISNLAEAREARRLQQPHQSSGKGYALLHRKIMDVPFYKDAEAAHLWVHLILKAKHTPEYVMTDAGEILVGRGKLLGG RNSLAFETGLKPDRVQYLLRKFKKLGMIDWVSHGKFSVFSVEKYDDYQSNFVPADYQQITTSKPAIPLPVSNTVPADYQQ ITTDKEYNNIISNTDVLESATADKKSDKKKPSVSCQDVVDAYHEILPEAPRIRALNDKRKNQIRTFWRKAGVITRQLDGH GFTMQDWRNYLSYVGENCRWMFEERPNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR >Mature_298_residues SNISNLAEAREARRLQQPHQSSGKGYALLHRKIMDVPFYKDAEAAHLWVHLILKAKHTPEYVMTDAGEILVGRGKLLGGR NSLAFETGLKPDRVQYLLRKFKKLGMIDWVSHGKFSVFSVEKYDDYQSNFVPADYQQITTSKPAIPLPVSNTVPADYQQI TTDKEYNNIISNTDVLESATADKKSDKKKPSVSCQDVVDAYHEILPEAPRIRALNDKRKNQIRTFWRKAGVITRQLDGHG FTMQDWRNYLSYVGENCRWMFEERPNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34573; Mature: 34441
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNISNLAEAREARRLQQPHQSSGKGYALLHRKIMDVPFYKDAEAAHLWVHLILKAKHTP CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC EYVMTDAGEILVGRGKLLGGRNSLAFETGLKPDRVQYLLRKFKKLGMIDWVSHGKFSVFS CEEECCCCCEEEECCEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEE VEKYDDYQSNFVPADYQQITTSKPAIPLPVSNTVPADYQQITTDKEYNNIISNTDVLESA EHHCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHH TADKKSDKKKPSVSCQDVVDAYHEILPEAPRIRALNDKRKNQIRTFWRKAGVITRQLDGH CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCEEEEECCC GFTMQDWRNYLSYVGENCRWMFEERPNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCEEEECCCCEEEEECCCCCCC >Mature Secondary Structure SNISNLAEAREARRLQQPHQSSGKGYALLHRKIMDVPFYKDAEAAHLWVHLILKAKHTP CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC EYVMTDAGEILVGRGKLLGGRNSLAFETGLKPDRVQYLLRKFKKLGMIDWVSHGKFSVFS CEEECCCCCEEEECCEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEE VEKYDDYQSNFVPADYQQITTSKPAIPLPVSNTVPADYQQITTDKEYNNIISNTDVLESA EHHCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHH TADKKSDKKKPSVSCQDVVDAYHEILPEAPRIRALNDKRKNQIRTFWRKAGVITRQLDGH CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCEEEEECCC GFTMQDWRNYLSYVGENCRWMFEERPNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCEEEECCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA