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The map label for this gene is yafT [H]

Identifier: 157159678

GI number: 157159678

Start: 236933

End: 237718

Strand: Direct

Name: yafT [H]

Synonym: EcHS_A0222

Alternate gene names: 157159678

Gene position: 236933-237718 (Clockwise)

Preceding gene: 157159676

Following gene: 157159696

Centisome position: 5.1

GC content: 42.62

Gene sequence:

>786_bases
ATGAATTCAAAAAAGCTTTGTTGCATATGTGTGTTATTCTCGCTGCTTGCAGGATGTGCCTCTGAATCTTCTATTGATGA
AAAGAAGAAAAAAGCTCAAGTCACACAAAATAATATTAATAAAAACACTCCCCAGCAACTGACAGAGAAAGATTTATTCG
GTAATGAAACCACTCTGGCCGTATCCGAAGAGGATATTCAAGCTGCGCTTGATGGAGATGAGTTCCGCGTTCCCCTTAAT
TCTCCTGTAATACTTGTTCAATCCGGCAACCGCGCACCGGAAACCATTATGCAGGAGGAGATGCGAAAATATTATACTGT
TTCCACATTCTCTGGTATCCCGGACAGGCAAAAGCCTCTGACTTGTAACAAAAACAAAGATAAAAATGAGAACGAGGATG
TTGCCAGTGCTGAGAATATGAACTGGATGCAGGCACTGCGTTTTGTGGCTGCAAAAGGACATCAGAAAGCGATTATTGTT
TACCAGGATACATTGCAGACAGGAAAATATGACTCTGCGCTGAAATCAACAGTATGGTCCGACTATAAAAATGAAAAACT
CACCGACGCTATCTCCCTGCGCTACCTGGTACGTTTCACGCTGGTGGATGTGGCAACAGGTGAGTGGGCTACCTGGTCGC
CGGTGAATTATGAATATAAAGTGCTTCCACCATTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAA
ATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAA

Upstream 100 bases:

>100_bases
ATTGATTTTGTTTGTTATTATTTAAGTGGGGTATATAATTAGAGTCCGTTATCAATGCTAAATATTCTAATCATTATGAC
AGGCGAGGGAGTGTCCAATT

Downstream 100 bases:

>100_bases
TAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACA
GTGCAAGAAAGGACATGGAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQNNINKNTPQQLTEKDLFGNETTLAVSEEDIQAALDGDEFRVPLN
SPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV
YQDTLQTGKYDSALKSTVWSDYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQ
IMQLKQKTYKAMVKDLVNRYQ

Sequences:

>Translated_261_residues
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQNNINKNTPQQLTEKDLFGNETTLAVSEEDIQAALDGDEFRVPLN
SPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV
YQDTLQTGKYDSALKSTVWSDYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQ
IMQLKQKTYKAMVKDLVNRYQ
>Mature_261_residues
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQNNINKNTPQQLTEKDLFGNETTLAVSEEDIQAALDGDEFRVPLN
SPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV
YQDTLQTGKYDSALKSTVWSDYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQ
IMQLKQKTYKAMVKDLVNRYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786410, Length=261, Percent_Identity=98.4674329501916, Blast_Score=536, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29631; Mature: 29631

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQNNINKNTPQQLTEKDLFGNETTLA
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEE
VSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPL
ECHHHHHHHCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHEEHHHCCCCCCCCCCC
TCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDTLQTGKYDSALKSTVWS
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH
DYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQ
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHH
IMQLKQKTYKAMVKDLVNRYQ
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQNNINKNTPQQLTEKDLFGNETTLA
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEE
VSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPL
ECHHHHHHHCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHEEHHHCCCCCCCCCCC
TCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDTLQTGKYDSALKSTVWS
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH
DYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQ
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHH
IMQLKQKTYKAMVKDLVNRYQ
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]