Definition | Escherichia coli E24377A, complete genome. |
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Accession | NC_009801 |
Length | 4,979,619 |
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The map label for this gene is yeeD [H]
Identifier: 157159037
GI number: 157159037
Start: 2266889
End: 2267116
Strand: Reverse
Name: yeeD [H]
Synonym: EcE24377A_2303
Alternate gene names: 157159037
Gene position: 2267116-2266889 (Counterclockwise)
Preceding gene: 157159262
Following gene: 157155424
Centisome position: 45.53
GC content: 51.32
Gene sequence:
>228_bases ATGGCGATTAAAAAGCTGGATGTGGTGACGCAGGTCTGTCCGTTTCCACTCATAGAAGCAAAAGCAGCACTGGCAGAAAT GGCCAGCGGCGATGAGTTGGTAATTGAGTTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAG GGCATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGTATCACCGTTCAAAAAGCCTGA
Upstream 100 bases:
>100_bases ATGATTCTCGGAGTCTGGACTGCGTCCTGGCTTGTGTATGTTCGACCGCAGCGTAAGGCGCGACTGGCAACTGCTGCGGC AAATTAAGTAAGGTGTAAAG
Downstream 100 bases:
>100_bases CTCAACATTGACCTCCGCCGTACCAGCGGCGGAGGCTTCAAATTAGACGATCTCTTCCGCGTACTGCCAAAGCGCTTTTA ACAGCGCCACTTTCTCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA
Sequences:
>Translated_75_residues MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA >Mature_74_residues AIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family [H]
Homologues:
Organism=Escherichia coli, GI1788322, Length=75, Percent_Identity=97.3333333333333, Blast_Score=148, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 8092; Mature: 7961
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATEAIPQWAAEEGHAITDY CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEECHH QQIGDAAWSITVQKA HHHCCCEEEEEEECC >Mature Secondary Structure AIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATEAIPQWAAEEGHAITDY CCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEECHH QQIGDAAWSITVQKA HHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]