Click here to switch to the map view.

The map label for this gene is bioY [H]

Identifier: 156980597

GI number: 156980597

Start: 2408326

End: 2408880

Strand: Reverse

Name: bioY [H]

Synonym: SAHV_2266

Alternate gene names: 156980597

Gene position: 2408880-2408326 (Counterclockwise)

Preceding gene: 156980598

Following gene: 156980596

Centisome position: 83.64

GC content: 34.05

Gene sequence:

>555_bases
ATGACAACAAAACAGTTAGTATATACAGCTTTAATGACAGCGATTATCGCTATTTTAGGAATGGTACCGGTAATTCCACT
ACCATTTTCTTCAGTACCAATTGTACTTCAAAACATTGGTATTTTCTTAGCAGGTGTGATTTTAGGACGTAAATATGGCA
CATTAAGTGTTATCGTCTTTTTATTATTAGTAGTTGCTGGCTTGCCATTGTTATCAGGTGGTCGCGGTGGCATCGGTGTA
TTCGCAGGTCCTTCAGCAGGGTTTTTACTATTATATCCAGTTGTAGCATTCATGATTGGTGCGATTCGTGATAGATTCAT
CAATGAAATTAATTTCTGGATTTTATTCGTTGGTATTTTAGTTTTTGGTGTTATAGCATTAGATGTTATTGGTACATTGA
TTATGGGCATGATTATTAACATACCATTTACGAAAGCTATTTCAATTTCATTAGCTTATTTGCCTGGTGATATATTAAAA
GCAATTGTAGCAAGTTTGATTGGTACAGCTTTACTTAATCACTCGCAGTTTCGTCAAATTATGGGATTAAAATAA

Upstream 100 bases:

>100_bases
GGTTTTAATTTATATAGAACAACTTATTGTAAACTTTTCATTTCTTAAAGTTTACAATGGTGCTATAATAATGGTCATGA
AATACGAAAGGAAGTAAAAA

Downstream 100 bases:

>100_bases
TCATATTTAAGTTAAGATAATAAAGTAATTGAATAAGTTGCTTTGAAATTTATAAAAGTGAAAGGAGTAGGTGTCAATGG
CTAGTATAAGTATGTCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTTKQLVYTALMTAIIAILGMVPVIPLPFSSVPIVLQNIGIFLAGVILGRKYGTLSVIVFLLLVVAGLPLLSGGRGGIGV
FAGPSAGFLLLYPVVAFMIGAIRDRFINEINFWILFVGILVFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILK
AIVASLIGTALLNHSQFRQIMGLK

Sequences:

>Translated_184_residues
MTTKQLVYTALMTAIIAILGMVPVIPLPFSSVPIVLQNIGIFLAGVILGRKYGTLSVIVFLLLVVAGLPLLSGGRGGIGV
FAGPSAGFLLLYPVVAFMIGAIRDRFINEINFWILFVGILVFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILK
AIVASLIGTALLNHSQFRQIMGLK
>Mature_183_residues
TTKQLVYTALMTAIIAILGMVPVIPLPFSSVPIVLQNIGIFLAGVILGRKYGTLSVIVFLLLVVAGLPLLSGGRGGIGVF
AGPSAGFLLLYPVVAFMIGAIRDRFINEINFWILFVGILVFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILKA
IVASLIGTALLNHSQFRQIMGLK

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19510; Mature: 19379

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKQLVYTALMTAIIAILGMVPVIPLPFSSVPIVLQNIGIFLAGVILGRKYGTLSVIVF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLVVAGLPLLSGGRGGIGVFAGPSAGFLLLYPVVAFMIGAIRDRFINEINFWILFVGIL
HHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILKAIVASLIGTALLNHSQFRQI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MGLK
HCCC
>Mature Secondary Structure 
TTKQLVYTALMTAIIAILGMVPVIPLPFSSVPIVLQNIGIFLAGVILGRKYGTLSVIVF
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLVVAGLPLLSGGRGGIGVFAGPSAGFLLLYPVVAFMIGAIRDRFINEINFWILFVGIL
HHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILKAIVASLIGTALLNHSQFRQI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MGLK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]