| Definition | Staphylococcus aureus subsp. aureus Mu3, complete genome. |
|---|---|
| Accession | NC_009782 |
| Length | 2,880,168 |
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The map label for this gene is pmi [H]
Identifier: 156980458
GI number: 156980458
Start: 2272622
End: 2273560
Strand: Reverse
Name: pmi [H]
Synonym: SAHV_2127
Alternate gene names: 156980458
Gene position: 2273560-2272622 (Counterclockwise)
Preceding gene: 156980459
Following gene: 156980457
Centisome position: 78.94
GC content: 34.4
Gene sequence:
>939_bases ATGCCATTATTTTTACAACCAATTTTAAAAACAAAATTATGGGGCGGTCAACGTCTAAGTGAGTTTGGATATCAATTAGA CAATGATACAACTGGGGAATGTTGGTGTGTGTCAGCACATCCAAATGGTACGAGCGAGATTATTAATGGACCATATCAAG GTCAAACATTAGACCGTATTTGGTCAGAACATCGTGAATTGTTTGGTGATTTCCCAAGCAAAGATTTTCCGCTTCTAACT AAAATAGTGGATGCAAGAGAATCACTTTCTATTCATGTGCACCCTGATAATTCTTATGCTTATGAGCATGAAAACGGGCA ATATGGCAAATCTGAATGTTGGTATATTATAGATGCAGAAGAAGATGCAGAAATAGTTATAGGGACATTAGCAGAGTCTA GAGAAGAAGTTGCGAATCATGTTCAACACGGAACGATAGAGTCGATACTTAGATATATTAAAGTAAAACCTGGAGAATTC TATTTTATTCCAGCAGGAACAGTACATACTATTTCTTCAGGAATATTAGCATACGAAACGATGCAATCGTCAGACATTAC ATATAGACTTTATGATTTCAATCGTCAAGATAATCAATATAATGATAGACCGTTAAATATTGAAAAAGCTTTAGACGTTA TTCAGTACAATGCACCATTACCTAATATTTTGCCTGAAAGTGAAATTATTGAAAACCATAAGTGTACACACATTGTATCG AATGATTTCTTTACATTGGTTAAATGGGAAATTTCTGGCACGTTAAATTATATGAAGCCTAGAGAGTTCTGTTTAGTTAC AGTGTTGGAAGGTGAAGGACAAATGATTGTCGATGGTGAAATTTTCAAACTGACTACTGGTACAAACTTTATTTTGACTT CTAAAGATTTGGATAGTGTCTTTGAAGGCGATTTCACATTGATGATTAGCTATGTGTAA
Upstream 100 bases:
>100_bases GGAAGTTTATAATACGATGTAAATGAGAACAAAATCAAAATATAATGGAACAACAACATCAGAGTTCTATTGCTTACTTA ATCACAATGGAGGTGCAACA
Downstream 100 bases:
>100_bases TAGTGTAATAACAATTTAGGAGTGAATGATTTGAAGCAATTTCTATATATTGCGTTAGTATGTGGTGTGATAGCAGGTCT TGGTGCTTTCTTACATATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLT KIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEF YFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSKDLDSVFEGDFTLMISYV
Sequences:
>Translated_312_residues MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLT KIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEF YFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSKDLDSVFEGDFTLMISYV >Mature_311_residues PLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTK IVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFY FIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSN DFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSKDLDSVFEGDFTLMISYV
Specific function: Unknown
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 35642; Mature: 35511
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI CCEEHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHH WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE HHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEECC EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET CCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHCCEEEEEE MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS ECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSKDLDSV CCEEEEEEEEECCEEECCCCCCEEEEEEEECCCCEEECCEEEEEECCCEEEEECCCHHHH FEGDFTLMISYV HCCCEEEEEEEC >Mature Secondary Structure PLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI CEEHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHH WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE HHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEECC EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET CCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHCCEEEEEE MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS ECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSKDLDSV CCEEEEEEEEECCEEECCCCCCEEEEEEEECCCCEEECCEEEEEECCCEEEEECCCHHHH FEGDFTLMISYV HCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8293960; 12397186 [H]