Click here to switch to the map view.

The map label for this gene is rsbV

Identifier: 156980382

GI number: 156980382

Start: 2197447

End: 2197773

Strand: Reverse

Name: rsbV

Synonym: SAHV_2051

Alternate gene names: 156980382

Gene position: 2197773-2197447 (Counterclockwise)

Preceding gene: 156980383

Following gene: 156980381

Centisome position: 76.31

GC content: 31.8

Gene sequence:

>327_bases
ATGAATCTTAATATAGAAACAACCACTCAAGATAAATTTTACGAAGTTAAAGTCGGTGGAGAATTAGATGTTTATACTGT
GCCTGAATTAGAAGAGGTTTTAACACCTATGAGACAAGATGGAACTCGTGATATTTATGTTAATTTAGAAAATGTGAGTT
ATATGGATTCGACAGGTTTAGGTTTATTCGTAGGTACATTAAAAGCATTAAACCAAAATGATAAAGAACTATACATTTTA
GGTGTGTCAGATCGTATCGGTAGACTATTTGAAATTACTGGTCTTAAGGATTTAATGCATGTTAATGAAGGAACGGAGGT
CGAATAA

Upstream 100 bases:

>100_bases
AAATTATTTCGATGGGTATATAATAATTTGAAATATAAATATGGTGGATACAGCGCTTAAAATGAAGATAAATATTTTTA
ATAAGTAGGAGTGTAATGAA

Downstream 100 bases:

>100_bases
CATGCAATCTAAAGAAGATTTTATCGAAATGCGCGTGCCAGCATCGGCAGAGTATGTAAGTTTAATTCGTTTAACACTTT
CTGGCGTTTTTTCGAGAGCT

Product: anti-sigmaB factor antagonist

Products: NA

Alternate protein names: Anti-anti-sigma-B factor

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRDIYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYIL
GVSDRIGRLFEITGLKDLMHVNEGTEVE

Sequences:

>Translated_108_residues
MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRDIYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYIL
GVSDRIGRLFEITGLKDLMHVNEGTEVE
>Mature_108_residues
MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRDIYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYIL
GVSDRIGRLFEITGLKDLMHVNEGTEVE

Specific function: Positive regulator of sigma-B activity. Non- phosphorylated rsbV binds to rsbW, preventing its association with sigma-B. When phosphorylated, releases rsbW, which is then free to complex with and inactivate sigma-B

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSBV_STAA8 (P60070)

Other databases:

- EMBL:   Y07645
- EMBL:   CP000253
- RefSeq:   YP_500778.1
- ProteinModelPortal:   P60070
- SMR:   P60070
- STRING:   P60070
- EnsemblBacteria:   EBSTAT00000028696
- GeneID:   3919171
- GenomeReviews:   CP000253_GR
- KEGG:   sao:SAOUHSC_02300
- eggNOG:   COG1366
- GeneTree:   EBGT00050000025199
- HOGENOM:   HBG708840
- OMA:   QEGTHDI
- ProtClustDB:   CLSK885744
- BioCyc:   SAUR93061:SAOUHSC_02300-MONOMER
- InterPro:   IPR003658
- InterPro:   IPR002645
- Gene3D:   G3DSA:3.30.750.24
- TIGRFAMs:   TIGR00377

Pfam domain/function: PF01740 STAS; SSF52091 STAS

EC number: NA

Molecular weight: Translated: 12205; Mature: 12205

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRDIYVNLENVSYMDSTGL
CCCCCCCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCEEECCCCC
GLFVGTLKALNQNDKELYILGVSDRIGRLFEITGLKDLMHVNEGTEVE
CHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHCCCCCCCCC
>Mature Secondary Structure
MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRDIYVNLENVSYMDSTGL
CCCCCCCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCEEECCCCC
GLFVGTLKALNQNDKELYILGVSDRIGRLFEITGLKDLMHVNEGTEVE
CHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA