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The map label for this gene is rex

Identifier: 156980362

GI number: 156980362

Start: 2167490

End: 2168125

Strand: Reverse

Name: rex

Synonym: SAHV_2031

Alternate gene names: 156980362

Gene position: 2168125-2167490 (Counterclockwise)

Preceding gene: 156980365

Following gene: 156980361

Centisome position: 75.28

GC content: 33.96

Gene sequence:

>636_bases
ATGAGTGACCAAGTTAAAATTCCTCGAGCAACTTTAAAACGTTTGCCGTTATATTATAGATTTGTCAGTTCATTAAAATC
TAAAGGTATAGATCGTGTAAATTCAAAAGCGATTAGCGATGCGTTACAAATTGACTCGGCAACAATTCGTCGTGACTTTT
CATATTTTGGCGAATTAGGTAAAAAAGGGTACGGATATAATATAGATAGTTTATTGGATTTCTTTAAATCTGAACTAAGC
GAGAGTGACATGATCAAAATCGCAATTGTCGGAGTTGGGAACCTAGGGAAAGCTTTGCTCACATATAACTTTTCAATACA
TGACGATATGACGATTACAGAAGCGTTTGACGTAAAAGAAGATGTTATTGGCCAGAAAATAGGGAACGTTATTGTAAAAG
ATAACGATGAATTAATAACAACATTGAAGAAGGAAGAAATAGATGTTGTGATTCTAACTACACCAGAAAGAGTTGCACAG
AAAGTTGCAGATGAACTCGTCCAAGCTGGTGTGAAAGGTATTTTAAACTTCACTCCTGGTAGAATTAATACGCCTTCAGA
TGTGCAAGTACATCAAATTGACTTAGGTATAGAATTACAGTCATTATTATTCTTTATGAAAAATTACAGTGAATAA

Upstream 100 bases:

>100_bases
TTGTAATCAATTATTTGTTTTTTAATAATCTAACAATTACGCTCTAACTCGTTTGAATACATAGATATAATTCATTCAAA
CACGAAGGAGGAAATAGCGA

Downstream 100 bases:

>100_bases
ATGTGATGTTAGCTTTGAATGATTAACCTTGTTATATCTTTAATTAATTATAGAACAGTCTGGGACTAAGTATGTCTCAG
GCTTTTTCTGTTATGTTTGA

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELGKKGYGYNIDSLLDFFKSELS
ESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKEDVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQ
KVADELVQAGVKGILNFTPGRINTPSDVQVHQIDLGIELQSLLFFMKNYSE

Sequences:

>Translated_211_residues
MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELGKKGYGYNIDSLLDFFKSELS
ESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKEDVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQ
KVADELVQAGVKGILNFTPGRINTPSDVQVHQIDLGIELQSLLFFMKNYSE
>Mature_210_residues
SDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELGKKGYGYNIDSLLDFFKSELSE
SDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKEDVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQK
VADELVQAGVKGILNFTPGRINTPSDVQVHQIDLGIELQSLLFFMKNYSE

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_STAA1 (A7X4L6)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442621.1
- ProteinModelPortal:   A7X4L6
- SMR:   A7X4L6
- STRING:   A7X4L6
- EnsemblBacteria:   EBSTAT00000003760
- GeneID:   5560235
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2031
- eggNOG:   COG2344
- GeneTree:   EBGT00050000025292
- HOGENOM:   HBG482264
- OMA:   TRGVGYD
- ProtClustDB:   PRK05472
- BioCyc:   SAUR418127:SAHV_2031-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 23599; Mature: 23468

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKE
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEHHHHHHHH
DVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQKVADELVQAGVKGILNFTPG
HHHHHHHCCEEEECCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCC
RINTPSDVQVHQIDLGIELQSLLFFMKNYSE
CCCCCCCCEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKE
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEHHHHHHHH
DVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQKVADELVQAGVKGILNFTPG
HHHHHHHCCEEEECCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCC
RINTPSDVQVHQIDLGIELQSLLFFMKNYSE
CCCCCCCCEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA