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The map label for this gene is xtmA [H]

Identifier: 156980329

GI number: 156980329

Start: 2139992

End: 2140561

Strand: Reverse

Name: xtmA [H]

Synonym: SAHV_1998

Alternate gene names: 156980329

Gene position: 2140561-2139992 (Counterclockwise)

Preceding gene: 156980330

Following gene: 156980326

Centisome position: 74.32

GC content: 37.02

Gene sequence:

>570_bases
ATGAGTGAGTTAACGGCAAAACAAGCGCGTTTTGTGAATGAGTATATAAGAACACTTAATGTAACACAAAGTGCCATAAA
AGCAGGCTATAGCGCAAATAGTGCACATGTGACAGGATGTAGGTTATTAAAGAAGCCACACATCAAGCAATATATACAAG
AACAAAAAGATAAGGTTATAGATGAGAATGTATTAACCGCAAAAGAGTTACTACATGTGCTTACGAATGCGGCAGTCGGT
GATGAAACAGAAACGAAAGAAGTTGTGGTCAAACGTGGAGAATATAAAGAGAATCCACAAAGTGGCAAAGTACAGTTAGT
CTATAACGAACATGTTGAACTGGTAGAGGTGCCAATTAAGCCAAGTGATCGTTTAAAAGCTCGTGATATGTTGGGTAAAT
ACCATAAGTTATTTACAGATAAGCATGATATTAACGGGAATGTGCCTATATTCATTAATATTGGTGAATGGGATGGCGAT
GATGAAGATTTAGATAAGACGGTACAAGAGGTATCTAACGCTAATCCTAATCATACTGTGATTGTGGATGATATACCGTT
AGAGGATTGA

Upstream 100 bases:

>100_bases
GACGTAGTTTTAAAGATATTAGCAATGTCTTAGAGTGTTCAGAACAATCTGTAAGATTATGGTATGAAACCTTATTAGAT
AAAATTGTGGAGGTGATAGA

Downstream 100 bases:

>100_bases
TTACAGTAAAAACGATTATCATATTGAGTTAGTGAGGATTAGTTTACTAATTCACCCTAGCTTTATATTAAAGCGTTATA
AAGATAAAAGGGAGAACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKVIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELVEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGD
DEDLDKTVQEVSNANPNHTVIVDDIPLED

Sequences:

>Translated_189_residues
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKVIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELVEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGD
DEDLDKTVQEVSNANPNHTVIVDDIPLED
>Mature_188_residues
SELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKVIDENVLTAKELLHVLTNAAVGD
ETETKEVVVKRGEYKENPQSGKVQLVYNEHVELVEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGDD
EDLDKTVQEVSNANPNHTVIVDDIPLED

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 21359; Mature: 21228

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
DENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSGKVQLVYNEHVELVEVPIK
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCC
PSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGDDEDLDKTVQEVSNANPNHTV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
IVDDIPLED
EEECCCCCC
>Mature Secondary Structure 
SELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKVI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
DENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSGKVQLVYNEHVELVEVPIK
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCC
PSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGDDEDLDKTVQEVSNANPNHTV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
IVDDIPLED
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]