Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
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Accession | NC_009784 |
Length | 2,204,018 |
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The map label for this gene is 156978184
Identifier: 156978184
GI number: 156978184
Start: 2072596
End: 2072988
Strand: Direct
Name: 156978184
Synonym: VIBHAR_06989
Alternate gene names: NA
Gene position: 2072596-2072988 (Clockwise)
Preceding gene: 156978182
Following gene: 156978185
Centisome position: 94.04
GC content: 41.22
Gene sequence:
>393_bases GTGCTATTCGGCAAAGAAGCTCTACTATTTGAACTAGAGGAGTATTTCGTCAATTTACCTTACGTCACAGCCTCCAGGGT TAGGCTTCGAGAAATTTGTGGGCTGAGCGAATTACAATACGTTACTTTTCTTGAAGTTTGGGGGGAGAAGTTCGATGGCA AGCATATCTACATCTCTGAAAGAGGGCTTAAAGAGTTTTTTTCGAACCATATTTTAGTCAATCGCTGGTGCATGTTGAGG GATCTTGAATTGCAAACAGTCCTTGATCAACTAAATAGTGGCAGGGATGACTTCTTACACCCCTCCTTAGTATCAAAAGG CATATTTATTTTGCGAAAGACTTCGTCAAACTTGCGTAAGCTAAAATACATAGCGACAGCATGCTCCGATTGA
Upstream 100 bases:
>100_bases TTTGCGAGACAGGTATGATTTAGGAGGAATTGTCGAAGTCATTGTACAATCATCGCTGCCACGCATACTGCCCTATAGCT CGTCACATAGTATCCACAAT
Downstream 100 bases:
>100_bases GCCAGATCGGCGAAATGTACTATCCATACATCGTTGTTCTAGATGATGTACACCTTGAAGAGCGGTATATCTTTTTGGTA TCGAGGCTCTTAAAAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MLFGKEALLFELEEYFVNLPYVTASRVRLREICGLSELQYVTFLEVWGEKFDGKHIYISERGLKEFFSNHILVNRWCMLR DLELQTVLDQLNSGRDDFLHPSLVSKGIFILRKTSSNLRKLKYIATACSD
Sequences:
>Translated_130_residues MLFGKEALLFELEEYFVNLPYVTASRVRLREICGLSELQYVTFLEVWGEKFDGKHIYISERGLKEFFSNHILVNRWCMLR DLELQTVLDQLNSGRDDFLHPSLVSKGIFILRKTSSNLRKLKYIATACSD >Mature_130_residues MLFGKEALLFELEEYFVNLPYVTASRVRLREICGLSELQYVTFLEVWGEKFDGKHIYISERGLKEFFSNHILVNRWCMLR DLELQTVLDQLNSGRDDFLHPSLVSKGIFILRKTSSNLRKLKYIATACSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15227; Mature: 15227
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGKEALLFELEEYFVNLPYVTASRVRLREICGLSELQYVTFLEVWGEKFDGKHIYISE CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEC RGLKEFFSNHILVNRWCMLRDLELQTVLDQLNSGRDDFLHPSLVSKGIFILRKTSSNLRK HHHHHHHHCCEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCEEEEEECCCHHHH LKYIATACSD HHHHHHHCCC >Mature Secondary Structure MLFGKEALLFELEEYFVNLPYVTASRVRLREICGLSELQYVTFLEVWGEKFDGKHIYISE CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEC RGLKEFFSNHILVNRWCMLRDLELQTVLDQLNSGRDDFLHPSLVSKGIFILRKTSSNLRK HHHHHHHHCCEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCEEEEEECCCHHHH LKYIATACSD HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA