Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977573

Identifier: 156977573

GI number: 156977573

Start: 1529096

End: 1530022

Strand: Reverse

Name: 156977573

Synonym: VIBHAR_06361

Alternate gene names: NA

Gene position: 1530022-1529096 (Counterclockwise)

Preceding gene: 156977574

Following gene: 156977572

Centisome position: 69.42

GC content: 46.28

Gene sequence:

>927_bases
GTGCTGAGAGCCATAAAATGGATTTTGTTGTTTCTACCGGCATCAATTTGGCTGGTGGCAAGGCACTATCATGATATTTG
GTGGGCGGAGAATCTAACCTCGATTCCCGCTCTTCTTTTATTCGTCTACCTAGGTTTTGCTCTGGTACTGTTGGTTTGTC
GCCACTGGGCGAAAGCCATTTTCTCTGGTTTAATCGGCTTCGCTTCTATTGCGTTTCTCTTACCCACCCAAATCACAAAC
AACCAAACCTGCGAAAATCCGTTGACGATAGTCCAATTCAACCTGTTCTACGAAAATCCGGACATTAATCAGTTCATCAA
TTATTTGCTTAAACGCCCTGCGGATTTGGTGGTGATGCAAGAGCTCTCGCCTCAAGTGGGGGAGAAACTTCATCTTCTCG
ACGATATTTATCCTTTTTATTACGGCGGTCAGCGCGGTGTTGGTTACCCGTCAAATCAGATGATTTTGAGCCGTTATCCT
TTGGAGCCAGTTTCGATTTATCACACTCCAGATGGTCAAGAGGTGATTCGAGCAACATGGCAAGTGGACAACCCAATTAC
CTTAATGACGGCACATCCTCCATCACCAAGAACCGAGCCGCTGTGGCAACGCAGAAATGCGTTGATTCGAACCATAGAAA
CCCTTACCGAATTGTACCCAACACCGGAAATGATTGTGATTGGGGACTTCAACCTTTCTGCTGCAAGCCCAAGATTTAGC
AAGCTGTTCTCTCGTTTCCAATCCCGACCGGTTGCCAGTTGGCCAACATCGATAAAAGGAGTATCAGTCCCATCCTTTGC
CATGATTGGGATTGATCACCTTTGGCTTAAGTCAGAAAACTCAAATCGGATGATCTGCTCAAGAGCATCGACAAATCAAC
CGAATGGCTCTGATCACAGGTTGGTGACGACTCTAATCGGGCAATGA

Upstream 100 bases:

>100_bases
CATTTAAGCCAATCTGTTTAGATACAGTTCAGCAGCGCACTGGCGAGTTGGGCGATTACATATAAGCTTATGATATGTAA
TCGCTAAACGAGCCGTGCGT

Downstream 100 bases:

>100_bases
GTTAGTACTTTCTATTGGCAAAGTGTCTAGTTATTTAGAATTAGGTTAAACCAAGCGACGGCTTGTCATGGAATTGACTG
ACTCTGACCGTCGCTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease/Exonuclease/Phosphatase

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MLRAIKWILLFLPASIWLVARHYHDIWWAENLTSIPALLLFVYLGFALVLLVCRHWAKAIFSGLIGFASIAFLLPTQITN
NQTCENPLTIVQFNLFYENPDINQFINYLLKRPADLVVMQELSPQVGEKLHLLDDIYPFYYGGQRGVGYPSNQMILSRYP
LEPVSIYHTPDGQEVIRATWQVDNPITLMTAHPPSPRTEPLWQRRNALIRTIETLTELYPTPEMIVIGDFNLSAASPRFS
KLFSRFQSRPVASWPTSIKGVSVPSFAMIGIDHLWLKSENSNRMICSRASTNQPNGSDHRLVTTLIGQ

Sequences:

>Translated_308_residues
MLRAIKWILLFLPASIWLVARHYHDIWWAENLTSIPALLLFVYLGFALVLLVCRHWAKAIFSGLIGFASIAFLLPTQITN
NQTCENPLTIVQFNLFYENPDINQFINYLLKRPADLVVMQELSPQVGEKLHLLDDIYPFYYGGQRGVGYPSNQMILSRYP
LEPVSIYHTPDGQEVIRATWQVDNPITLMTAHPPSPRTEPLWQRRNALIRTIETLTELYPTPEMIVIGDFNLSAASPRFS
KLFSRFQSRPVASWPTSIKGVSVPSFAMIGIDHLWLKSENSNRMICSRASTNQPNGSDHRLVTTLIGQ
>Mature_308_residues
MLRAIKWILLFLPASIWLVARHYHDIWWAENLTSIPALLLFVYLGFALVLLVCRHWAKAIFSGLIGFASIAFLLPTQITN
NQTCENPLTIVQFNLFYENPDINQFINYLLKRPADLVVMQELSPQVGEKLHLLDDIYPFYYGGQRGVGYPSNQMILSRYP
LEPVSIYHTPDGQEVIRATWQVDNPITLMTAHPPSPRTEPLWQRRNALIRTIETLTELYPTPEMIVIGDFNLSAASPRFS
KLFSRFQSRPVASWPTSIKGVSVPSFAMIGIDHLWLKSENSNRMICSRASTNQPNGSDHRLVTTLIGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35124; Mature: 35124

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAIKWILLFLPASIWLVARHYHDIWWAENLTSIPALLLFVYLGFALVLLVCRHWAKAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSGLIGFASIAFLLPTQITNNQTCENPLTIVQFNLFYENPDINQFINYLLKRPADLVVMQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEHHH
ELSPQVGEKLHLLDDIYPFYYGGQRGVGYPSNQMILSRYPLEPVSIYHTPDGQEVIRATW
HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHE
QVDNPITLMTAHPPSPRTEPLWQRRNALIRTIETLTELYPTPEMIVIGDFNLSAASPRFS
ECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH
KLFSRFQSRPVASWPTSIKGVSVPSFAMIGIDHLWLKSENSNRMICSRASTNQPNGSDHR
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCCCCEEEECCCCCCCCCCCCE
LVTTLIGQ
EHHEECCC
>Mature Secondary Structure
MLRAIKWILLFLPASIWLVARHYHDIWWAENLTSIPALLLFVYLGFALVLLVCRHWAKAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSGLIGFASIAFLLPTQITNNQTCENPLTIVQFNLFYENPDINQFINYLLKRPADLVVMQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEHHH
ELSPQVGEKLHLLDDIYPFYYGGQRGVGYPSNQMILSRYPLEPVSIYHTPDGQEVIRATW
HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHE
QVDNPITLMTAHPPSPRTEPLWQRRNALIRTIETLTELYPTPEMIVIGDFNLSAASPRFS
ECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH
KLFSRFQSRPVASWPTSIKGVSVPSFAMIGIDHLWLKSENSNRMICSRASTNQPNGSDHR
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCCCCCEEEECCCCCCCCCCCCE
LVTTLIGQ
EHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA