Definition Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome.
Accession NC_009783
Length 3,765,351

Click here to switch to the map view.

The map label for this gene is dnaE

Identifier: 156975491

GI number:

Start: 3245590

End: 3249021

Strand: Reverse

Name: dnaE

Synonym: VIBHAR_03222

Alternate gene names: NA

Gene position: NA

Preceding gene: 156975492

Following gene: 156975490

Centisome position: NA

GC content: NA

Gene sequence:

>3432_bases
ATGGTGGATGGTATCAACAAAGTTCCACCGCTCGTTAAGAAAGTCGCCGAACTCGGCATGCCTGCAATGGCATTGACCGA
TTTCACTAACCTATGTGGTTTGGTGAAATACTATGGCACTGCGCACGGCAGTGGTGTGAAGCCAATCATCGGTGCTGATT
TCAAAATGCAATCGGATGAGTTTGGCGAGGAGCTGACGCAATTAACGTTACTTGCGGCAAACAACGAAGGTTATAAAAAC
CTCACGTTGCTGATCTCAAAAGCTTACCTTCGTGGTCACGTACAGCACCAACCGGTGCTCGACAAAGCTTGGTTGGCTGA
ACTATCAGAAGGTTTGATCGTTCTATCAGGCGCGAAAAACGGTGAAATCGGTAAAGCATTGCTAAAAGGCAACCGTAAAG
TTGTCGACAGTTGTGTCGAGTTCTACAACCAATACTTCCCAGATCGCTTCTATCTAGAATTGGTTCGTACTGGTCGTCCG
GATGAAGAAACTTACCTGCACTTTGCGATCGAATTGGCAGAAGAGCTTGAATTGCCAGTCGTTGCAACCAACGAAGTTGT
TTTCATCAGTGAAGACTTATTTGACGCCCATGAAATCCGCGTTGCAATCCACGATGGTTACACCCTAGAAGATCCGCGTC
GTCCAAAGAACTACAGCCCAGAACAATACCTGCGTACTGAAGAGGAAATGTGCGAGCTGTTTGCCGACATTCCGGAAGCG
TTAGAAAACAGTGTTGAAATTGCCAAGCGTTGTAACGTGACAGTACGTTTGGGTGAATACTTCCTACCTGCCTTCCCAAC
TGAAGGTATGGAAGAGACCGACTTCTTGGTCATGAAGTCTCGTGAAGGTCTTGAAGAGCGTCTAGAGTTCCTGTTCCCAG
ATGAGGAAGAGCGCAAGCAGCGTCGTCCTGAATACGATGATCGTCTGCAAATCGAACTCGACGTAATCAACCAAATGGGA
TTCCCTGGTTACTTCTTGATCGTAATGGAGTTCATCCAGTGGTCGAAAGACAACGCGATTCCGGTAGGTCCGGGTCGTGG
TTCGGGTGCTGGTTCTTTGGTGGCATATGCACTGAAGATCACCGACCTTGACCCATTGGAATACGACCTTCTATTCGAAC
GTTTCTTGAACCCAGAACGAGTCTCGATGCCCGATTTCGACGTCGACTTCTGTATGGATAAGCGTGACCAAGTAATTGAC
CACGTTGCGGAAATGTATGGCCGTGATGCGGTATCACAGATCATCACCTTTGGTACCATGGCGGCGAAAGCGGTAATCCG
TGACGTAGGCCGTGTACTTGGCCACCCGTTTGGCTTCGTTGATCGTATTTCAAAATTGGTTCCGCCTGATCCGGGCATGA
CGCTAGAGAAAGCGTTCAAAGCTGAGCCTGCACTGCCAGAGTTGTATGACGCAGACGAAGAAGTGAAAGAGCTTATCGAC
ATGTGTCGCCTCCTTGAAGGTTGTACACGTAATGCCGGTAAGCACGCGGGTGGTGTTGTAATCTCACCAACCACCATTAC
AGACTTCGCGCCGATTTATGCTGACTCGGAAGGTCACTTCCCGGTTACTCAGTTTGATAAGAACGACGTTGAAACGGCCG
GTCTGGTTAAGTTTGACTTCTTGGGTCTGCGTACCCTAACCATCATCGACTGGGCGTTGGGTCTGATTAACCCGCGTCTA
GAACGCGAAGGCAAAGATCCTGTTCGCATCGAATCGATTCCACTGGATGATGCGGCGTCATTCCGTTTGCTGCAAAACTC
AGAAACCACTGCGGTATTCCAGCTTGAATCGCGCGGTATGAAAGAGCTGATTAAACGTCTGCAACCGGACTGTTTTGAAG
ACATCATCGCATTGGTGGCACTGTTCCGTCCGGGCCCATTGCAGTCGGGCATGGTAGATAACTTTATCGACCGTAAGCAC
GGTCGTGAGGCGATCTCTTATCCTGATGAAAAGTGGCAACACGAATCGCTTAAAGAGATTCTGGATCCGACTTACGGCAT
CATCCTGTATCAAGAACAGGTAATGCAGATTGCACAGGTACTGTCTGGCTACACCCTTGGTGGTGCGGACATGCTTCGTC
GTGCGATGGGTAAGAAAAAACCGGAAGAGATGGCGAAACAGCGTGCTACCTTCGAAGAGGGGGCAATTGCCAACGGCGTC
GATGGCGAGTTGGCGATGAAGATCTTCGACTTGGTAGAGAAGTTCGCGGGTTACGGCTTTAATAAATCTCACTCGGCAGC
CTACGCACTGGTTTCGTACCAAACGCTATGGCTGAAGATGCACTATCCGGCAGAATTCATGGCAGCGGTAATGACCGCCG
ATATGGATAACACTGAGAAAGTGGTTGGCCTAGTAGACGAATGTTTCCGCATGAAACTCACCGTGCTTCCGCCAGACATC
AATGCCGGCTTGTACCGCTTTAACGTGGATGAGAATGGCGCGATTGTTTACGGCATCGGCGCGATTAAAGGTGTGGGCGA
AGGTCCGATCGATGCGATCTTAGAAGCGCGCAACAAAGGTGGTCACTTCATTGACCTATTTGACTTCTGTGCGCGAATCG
ACCTGAAAAAGGTCAACAAGCGTGTTATCGAAAAACTGATTTACGCGGGCGCACTCGACAGGCTCGGTCCACACCGTGCG
GCATTGATGGCATCGCTCAATGATGCGGTGAAAGCGGCAAGCCAACACCACCAAGCGGAAGCCTTTGGTCAAACCGATAT
GTTCGGTGTTTTGACTGATGCGCCAGAAGAGGTGGAACACAAATATACTCAAGTGCCAGCATGGCCAGAGAAAGTATGGT
TAGAGGGTGAACGTGAGACGCTCGGTTTATATTTGACCGGCCACCCAGTTAACGCATACATAAAGGAACTAAATAAATAC
GTTAGTTGTCGACTAAAAGACGCAACCCCAACTCGCCGTGATCAATCCGTGACAGTAGCGGGCTTGGTAATTGCAGCTCG
TGTGATGACAACCAAGCGTGGTACGCGAATCGGCATCATGACTCTGGACGATCGAAGCGGTCGAATGGAGGTGATGTTGT
TCTCGGATGCGCTTGATAGGTATGCAGAACTTCTCGAAAAAGATAAAATTCTGGTGGTTTCTGGACAGGTCAGCTTTGAT
GACTTCAACGGTGGCCTTAAAATGTCGGCGCGTGAAGTTATGGATCTGGGTACTGCACGTGAAAAATACGCACGTGGTTT
GTCGGTATCTATTGATGCTAACCAGATCAACGATAAATTCTTTGAACAATTTACGCGTATTTTAGAGCCGCACAAAGCCG
GAACCGTACCTGTCAATGTATACTACCAGCGTGCCGACGCCAGAGCGCGGTTAACATTGGGCACCGAGTGGCGAGTAACG
CCAACTGATACATTGCTAGACGATTTAAAACAGTTACTTGGTAAAGGCCAAGTAGAACTCGAATTTAACTAA

Upstream 100 bases:

>100_bases
GCCTGCTTTAGGTTAGAATCCCAAATAAGATATAGTTTTACGGTACCTGTTAATGTCAGTTCCCAAGTTCATTCACCTAA
GAGTTCACAGTGATTTCTCG

Downstream 100 bases:

>100_bases
AAAATTCAGCGCAATACGTAAGACGCTGAGTCAAAAAGGATTCATAGATGAGCCTAAACTTTCTTGAATTTGAAAAGCCA
ATTGCAGAACTAGAAGCAAA

Product: DNA polymerase III subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1143_residues
MVDGINKVPPLVKKVAELGMPAMALTDFTNLCGLVKYYGTAHGSGVKPIIGADFKMQSDEFGEELTQLTLLAANNEGYKN
LTLLISKAYLRGHVQHQPVLDKAWLAELSEGLIVLSGAKNGEIGKALLKGNRKVVDSCVEFYNQYFPDRFYLELVRTGRP
DEETYLHFAIELAEELELPVVATNEVVFISEDLFDAHEIRVAIHDGYTLEDPRRPKNYSPEQYLRTEEEMCELFADIPEA
LENSVEIAKRCNVTVRLGEYFLPAFPTEGMEETDFLVMKSREGLEERLEFLFPDEEERKQRRPEYDDRLQIELDVINQMG
FPGYFLIVMEFIQWSKDNAIPVGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVID
HVAEMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFKAEPALPELYDADEEVKELID
MCRLLEGCTRNAGKHAGGVVISPTTITDFAPIYADSEGHFPVTQFDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRL
EREGKDPVRIESIPLDDAASFRLLQNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKH
GREAISYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRATFEEGAIANGV
DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKMHYPAEFMAAVMTADMDNTEKVVGLVDECFRMKLTVLPPDI
NAGLYRFNVDENGAIVYGIGAIKGVGEGPIDAILEARNKGGHFIDLFDFCARIDLKKVNKRVIEKLIYAGALDRLGPHRA
ALMASLNDAVKAASQHHQAEAFGQTDMFGVLTDAPEEVEHKYTQVPAWPEKVWLEGERETLGLYLTGHPVNAYIKELNKY
VSCRLKDATPTRRDQSVTVAGLVIAARVMTTKRGTRIGIMTLDDRSGRMEVMLFSDALDRYAELLEKDKILVVSGQVSFD
DFNGGLKMSAREVMDLGTAREKYARGLSVSIDANQINDKFFEQFTRILEPHKAGTVPVNVYYQRADARARLTLGTEWRVT
PTDTLLDDLKQLLGKGQVELEFN

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA